RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 VSIRQ9H7M9 311 aa9.11□□□□□ -0.95
CTSA-210ENST00000606000 STARD9Q9P2P6 4700 aa9.1□□□□□ -0.95
CTSA-210ENST00000606000 RPS10-NUDT3A0A1W2PQS6 291 aa9.1□□□□□ -0.95
CTSA-210ENST00000606000 SFT2D2O95562 160 aa9.1□□□□□ -0.95
CTSA-210ENST00000606000 IFNA10P01566 189 aa9.1□□□□□ -0.95
CTSA-210ENST00000606000 SRPXP78539 464 aa9.1□□□□□ -0.95
CTSA-210ENST00000606000 RBMS2Q15434 407 aaKnown RBP9.1□□□□□ -0.95
CTSA-210ENST00000606000 RNASEH2CQ8TDP1 164 aaKnown RBP9.1□□□□□ -0.95
CTSA-210ENST00000606000 S100ZQ8WXG8 99 aa9.1□□□□□ -0.95
CTSA-210ENST00000606000 ACY3Q96HD9 319 aa9.1□□□□□ -0.95
CTSA-210ENST00000606000 SLC25A21Q9BQT8 299 aaPredicted RBP9.1□□□□□ -0.95
CTSA-210ENST00000606000 OVOL2Q9BRP0 275 aa9.1□□□□□ -0.95
CTSA-210ENST00000606000 MAP6D1Q9H9H5 199 aa9.1□□□□□ -0.95
CTSA-210ENST00000606000 FLVCR2Q9UPI3 526 aa9.1□□□□□ -0.95
CTSA-210ENST00000606000 PITX3O75364 302 aa9.09□□□□□ -0.95
CTSA-210ENST00000606000 IAPPP10997 89 aa9.09□□□□□ -0.95
CTSA-210ENST00000606000 OR10J1P30954 320 aa9.09□□□□□ -0.95
CTSA-210ENST00000606000 BTCP35070 178 aa9.09□□□□□ -0.95
CTSA-210ENST00000606000 ZNF846Q147U1 533 aa9.09□□□□□ -0.95
CTSA-210ENST00000606000 DEFB135Q30KP9 77 aa9.09□□□□□ -0.95
CTSA-210ENST00000606000 CENPSQ8N2Z9 138 aa9.09□□□□□ -0.95
CTSA-210ENST00000606000 NPIPB3Q92617 1050 aa9.09□□□□□ -0.95
CTSA-210ENST00000606000 HOXB5P09067 269 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 SLC25A4P12235 298 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 NPPCP23582 126 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 RPL11P62913 178 aaKnown RBP9.08□□□□□ -0.96
CTSA-210ENST00000606000 USF2Q15853 346 aaPredicted RBP9.08□□□□□ -0.96
CTSA-210ENST00000606000 LINC00299Q6ZSB3 139 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 LRTM2Q8N967 370 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 OR1S2Q8NGQ3 325 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 DEDD2Q8WXF8 326 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 METTL26Q96S19 204 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 CCDC32Q9BV29 185 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 WDR12Q9GZL7 423 aaKnown RBP9.08□□□□□ -0.96
CTSA-210ENST00000606000 MS4A6AQ9H2W1 248 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 DNAH7Q8WXX0 4024 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 STAB2Q8WWQ8 2551 aa9.08□□□□□ -0.96
CTSA-210ENST00000606000 TRAV30A0A087WSZ9 112 aa9.07□□□□□ -0.96
CTSA-210ENST00000606000 DUXBA0A1W2PPF3 345 aa9.07□□□□□ -0.96
CTSA-210ENST00000606000 MPTX1A8MV57 137 aa9.07□□□□□ -0.96
CTSA-210ENST00000606000 PLA2G10O15496 165 aa9.07□□□□□ -0.96
CTSA-210ENST00000606000 ADAP1O75689 374 aa9.07□□□□□ -0.96
CTSA-210ENST00000606000 NDUFB6O95139 128 aa9.07□□□□□ -0.96
CTSA-210ENST00000606000 CRYBB3P26998 211 aa9.07□□□□□ -0.96
CTSA-210ENST00000606000 P2RY1P47900 373 aa9.07□□□□□ -0.96
CTSA-210ENST00000606000 EWSR1Q01844 656 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTSA-210ENST00000606000 GGNBP1Q5YKI7 109 aa9.07□□□□□ -0.96
CTSA-210ENST00000606000 LEMD1Q68G75 181 aa9.07□□□□□ -0.96
CTSA-210ENST00000606000 MAGT1Q9H0U3 335 aa9.07□□□□□ -0.96
CTSA-210ENST00000606000 C9orf170A2RU37 121 aa9.06□□□□□ -0.96
CTSA-210ENST00000606000 LYRM1O43325 122 aa9.06□□□□□ -0.96
CTSA-210ENST00000606000 IFNA4P05014 189 aa9.06□□□□□ -0.96
CTSA-210ENST00000606000 IL4P05112 153 aa9.06□□□□□ -0.96
CTSA-210ENST00000606000 ANXA7P20073 488 aaKnown RBP9.06□□□□□ -0.96
CTSA-210ENST00000606000 APOC4P55056 127 aa9.06□□□□□ -0.96
CTSA-210ENST00000606000 DEFB131AP59861 70 aa9.06□□□□□ -0.96
CTSA-210ENST00000606000 IFITM3Q01628 133 aa9.06□□□□□ -0.96
CTSA-210ENST00000606000 ETFRF1Q6IPR1 90 aa9.06□□□□□ -0.96
CTSA-210ENST00000606000 STXBP6Q8NFX7 210 aa9.06□□□□□ -0.96
CTSA-210ENST00000606000 RABAC1Q9UI14 185 aa9.06□□□□□ -0.96
CTSA-210ENST00000606000 PAIP2BQ9ULR5 123 aaKnown RBP9.06□□□□□ -0.96
CTSA-210ENST00000606000 U3KQ87 197 aa9.06□□□□□ -0.96
CTSA-210ENST00000606000 RYR2Q92736 4967 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 IGKV1D-37A0A075B6S9 117 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 NAP1L6A6NFF2 107 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 CENPXA8MT69 81 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 H3BP45 60 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 DNASE2O00115 360 aaPredicted RBP9.05□□□□□ -0.96
CTSA-210ENST00000606000 SCGB2A1O75556 95 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 UPK1BO75841 260 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 TOMM40O96008 361 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 PSG1P11464 419 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 BMI1P35226 326 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 UBE2MP61081 183 aaKnown RBP9.05□□□□□ -0.96
CTSA-210ENST00000606000 YPEL3P61236 119 aaPredicted RBP9.05□□□□□ -0.96
CTSA-210ENST00000606000 ZNF90Q03938 601 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 GAMTQ14353 236 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 GSG1LQ6UXU4 331 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 Q8WTZ3 238 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 TMEM231Q9H6L2 316 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 CACFD1Q9UGQ2 172 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 TBC1D24Q9ULP9 559 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 TMED3Q9Y3Q3 217 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 U3KQE9 123 aa9.05□□□□□ -0.96
CTSA-210ENST00000606000 A0A0J9YWU9 116 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 A0A1W2PS18 150 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 K7EQG2 157 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 WRBO00258 174 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 SPRY2O43597 315 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 HNRNPCP07910 306 aaKnown RBP eCLIP9.04□□□□□ -0.96
CTSA-210ENST00000606000 ZNF688P0C7X2 276 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 SLC25A6P12236 298 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 PAFAH1B2P68402 229 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 DHRS2Q13268 280 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 C16orf54Q6UWD8 224 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 Q6ZWC4 215 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 NOXA1Q86UR1 476 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 STPG3Q8N7X2 389 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 OR51G1Q8NGK1 321 aa9.04□□□□□ -0.96
CTSA-210ENST00000606000 GLMPQ8WWB7 406 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms