RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ZNF611Q8N823 705 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 OR10D3Q8NH80 312 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 BADQ92934 168 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 MMABQ96EY8 250 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 COQ2Q96H96 371 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 CDX2Q99626 313 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 MGST2Q99735 147 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 CITED2Q99967 270 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 SPXQ9BT56 116 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 RNASE7Q9H1E1 156 aaKnown RBP3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 THYN1Q9P016 225 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZNF492Q9P255 531 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 PRO0461Q9UI25 63 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 PTPRBP23467 1997 aa3.29□□□□□ -1.88
HMGB1P50-201ENST00000605814 TNRC6BQ9UPQ9 1833 aaKnown RBP3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 TRAV24A0A0B4J272 114 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 TRGV8A0A0C4DH27 118 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 TRBV6-1A0A0K0K1D8 114 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 A0A1B0GWB2 263 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 TMEM262E9PQX1 116 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 H3BMG7 143 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 M0QXV9 152 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 CCL16O15467 120 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 NKX2-8O15522 239 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 KLF7O75840 302 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 IGHG3P01860 377 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 SRD5A1P18405 259 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 BCL3P20749 454 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 DUTP33316 252 aaKnown RBP3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 FASLGP48023 281 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 FABP6P51161 128 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 PROK1P58294 105 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 BRWD1-AS2P59051 145 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 TAS2R45P59539 299 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 HBBP68871 147 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 TLE1Q04724 770 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 RUNX3Q13761 415 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 WFDC2Q14508 124 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 GUSBP1Q15486 140 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 GCSAMLQ5JQS6 135 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZNF841Q6ZN19 808 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZNF497Q6ZNH5 498 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 H2BFWTQ7Z2G1 175 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 PIP4P1Q86T03 277 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 PRR22Q8IZ63 422 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 RPRMLQ8N4K4 120 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 SPEM1Q8N4L4 309 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 FADS6Q8N9I5 356 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 C9orf106Q8NAJ2 232 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 OR10G6Q8NH81 332 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 PIGCQ92535 297 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 ST6GALNAC6Q969X2 333 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 LINC01600Q96MT4 127 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 HSD17B10Q99714 261 aaKnown RBP3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 NUDT22Q9BRQ3 303 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 SPANXDQ9BXN6 97 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 MRPL32Q9BYC8 188 aaKnown RBP3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 HCFC1R1Q9NWW0 138 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 SPANXCQ9NY87 97 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 DLL3Q9NYJ7 618 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 IL36RNQ9UBH0 155 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 WNT16Q9UBV4 365 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 INSIG2Q9Y5U4 225 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZNF407Q9C0G0 2248 aa3.28□□□□□ -1.88
HMGB1P50-201ENST00000605814 C2orf16Q68DN1 1984 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 DIDO1Q9BTC0 2240 aaKnown RBP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 C19orf71A6NCJ1 209 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 LINC01546A6NGU7 62 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 CGB1A6NKQ9 187 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 IGLL5B9A064 214 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 PRKNO60260 465 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 SPINK4O60575 86 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 SS18L1O75177 396 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 FOXH1O75593 365 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 IGKV2-30P06310 120 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 SP1P08047 785 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 SPINK8P0C7L1 97 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 C8orf88P0DMB2 117 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 GABRG2P18507 467 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 G6PCP35575 357 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 MPV17P39210 176 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 MYCNOSP40205 109 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 TNFRSF4P43489 277 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 TCTAP57738 103 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 LY6DQ14210 128 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF146Q15072 292 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 SPATA31B1PQ5VZV4 182 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 MIC13Q5XKP0 118 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 SUMO4Q6EEV6 95 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 RBPMS2Q6ZRY4 209 aaKnown RBP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 LINC00173Q6ZV60 143 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 ANKRD37Q7Z713 158 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 RPS19BP1Q86WX3 136 aaKnown RBP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 SBSPONQ8IVN8 264 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 ABCA7Q8IZY2 2146 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 Q8N9P0 234 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 NFAM1Q8NET5 270 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 OR1L3Q8NH93 324 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms