RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 GCN1Q92616 2671 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 IGLV11-55A0A075B6I3 123 aa13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 SH2D7A6NKC9 451 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 C9JQL5 133 aa13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 YIF1AO95070 293 aa13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 ZNF726P1Q15940 193 aa13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 AKIRIN2Q53H80 203 aa13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 UNQ5815/PRO19632Q6UWF5 114 aa13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 STPG3Q8N7X2 389 aa13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 OR5T1Q8NG75 326 aa13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 FAM110DQ8TAY7 271 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 FANCD2OSQ96PS1 177 aa13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 PRDM13Q9H4Q3 707 aa13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 RPS10P5Q9NQ39 176 aa13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 MRPL36Q9P0J6 103 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-224ENST00000600718 PDZD2O15018 2839 aa13.9□□□□□ -0.19
SHKBP1-224ENST00000600718 IGHV4-59P01825 116 aa13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 LINC00869P0C866 280 aa13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 Q6YL49 198 aa13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 CYP2G1PQ6ZSU1 146 aa13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 TMUB1Q9BVT8 246 aa13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 THYN1Q9P016 225 aa13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 CTXND1A0A1B0GTU2 59 aa13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 LINC01548A6NM66 108 aa13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 CD5LO43866 347 aa13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 HIST1H1BP16401 226 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 CRIP2P52943 208 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 FABP9Q0Z7S8 132 aa13.89□□□□□ -0.19
SHKBP1-224ENST00000600718 IGHV3-21A0A0B4J1V1 117 aa13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 TCRBV4S1A1TA0A5B7 111 aa13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 ZFP92A6NM28 416 aa13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 SEC14L6B5MCN3 397 aa13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 K7EIM0 57 aa13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 GATCO43716 136 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 SELENOTP62341 195 aa13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 KLK9Q2XQG4 91 aa13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 ZNF600Q6ZNG1 722 aa13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 OR4X1Q8NH49 305 aa13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 TRGV9Q99603 122 aa13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 KLK9Q9UKQ9 250 aa13.88□□□□□ -0.19
SHKBP1-224ENST00000600718 IGKV1D-37A0A075B6S9 117 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 ECSCRQ19T08 205 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 C9orf152Q5JTZ5 239 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 LCN15Q6UWW0 184 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 A0A1B0GV50 99 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 IGHG2P01859 326 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 CCL20P78556 96 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 KRTAP1-1Q07627 177 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 AWAT1Q58HT5 328 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 GCSAMLQ5JQS6 135 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 SPNS3Q6ZMD2 512 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 SSX7Q7RTT5 188 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 RAB24Q969Q5 203 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 ZNF48Q96MX3 618 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 TNFRSF19Q9NS68 423 aa13.87□□□□□ -0.19
SHKBP1-224ENST00000600718 NBPF19A0A087WUL8 3843 aa13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 A0A1W2PPV4 95 aa13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 C7orf77A4D0Y5 90 aa13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 MAP1LC3B2A6NCE7 125 aa13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 IGF1P05019 195 aa13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 RAB5AP20339 215 aa13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 CDC34P49427 236 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 SLC35E3Q7Z769 313 aa13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 PBDC1Q9BVG4 233 aa13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 C19orf24Q9BVV8 132 aa13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 MAP1LC3BQ9GZQ8 125 aa13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 SLC25A22Q9H936 323 aa13.86□□□□□ -0.19
SHKBP1-224ENST00000600718 RHEBQ15382 184 aa13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 TMPRSS5Q9H3S3 457 aa13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 TRAV41A0A0B4J266 112 aa13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 G3V318 75 aa13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 AP4M1O00189 453 aa13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 CLN5O75503 358 aa13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 GATA2P23769 480 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 BLCAPP62952 87 aa13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 GUK1Q16774 197 aa13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 C19orf54Q5BKX5 351 aa13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 C1QL4Q86Z23 238 aa13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 VPREB3Q9UKI3 123 aa13.85□□□□□ -0.19
SHKBP1-224ENST00000600718 NAV3Q8IVL0 2385 aa13.84□□□□□ -0.19
SHKBP1-224ENST00000600718 NDUFB8O95169 186 aa13.84□□□□□ -0.19
SHKBP1-224ENST00000600718 MFAP4P55083 255 aa13.84□□□□□ -0.19
SHKBP1-224ENST00000600718 RHOBP62745 196 aa13.84□□□□□ -0.19
SHKBP1-224ENST00000600718 ZNF90Q03938 601 aa13.84□□□□□ -0.19
SHKBP1-224ENST00000600718 FBXL7Q9UJT9 491 aa13.84□□□□□ -0.19
SHKBP1-224ENST00000600718 OR2J3O76001 311 aa13.83□□□□□ -0.19
SHKBP1-224ENST00000600718 SRP14P37108 136 aaKnown RBP13.83□□□□□ -0.19
SHKBP1-224ENST00000600718 AKR1C3P42330 323 aa13.83□□□□□ -0.19
SHKBP1-224ENST00000600718 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.19
SHKBP1-224ENST00000600718 PMS2P11Q13670 270 aa13.83□□□□□ -0.19
SHKBP1-224ENST00000600718 SCRT1Q9BWW7 348 aa13.83□□□□□ -0.19
SHKBP1-224ENST00000600718 EIF5A2Q9GZV4 153 aaKnown RBP13.83□□□□□ -0.19
SHKBP1-224ENST00000600718 YAE1D1Q9NRH1 226 aa13.83□□□□□ -0.19
SHKBP1-224ENST00000600718 UNC79Q9P2D8 2635 aa13.83□□□□□ -0.2
SHKBP1-224ENST00000600718 MAP1AP78559 2803 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-224ENST00000600718 TRAV30A0A087WSZ9 112 aa13.83□□□□□ -0.2
SHKBP1-224ENST00000600718 TRBV9A0A0B4J1U6 114 aa13.83□□□□□ -0.2
SHKBP1-224ENST00000600718 RBFOX3A6NFN3 312 aa13.83□□□□□ -0.2
SHKBP1-224ENST00000600718 IGLC1P0CG04 106 aa13.83□□□□□ -0.2
SHKBP1-224ENST00000600718 VN1R17PQ8TDU5 208 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms