RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 ZFAND3Q9H8U3 227 aa12.34□□□□□ -0.43
DNMT1-229ENST00000593049 NUDT15Q9NV35 164 aa12.34□□□□□ -0.43
DNMT1-229ENST00000593049 MRPL36Q9P0J6 103 aaKnown RBP12.34□□□□□ -0.43
DNMT1-229ENST00000593049 TRAV6A0A075B6T7 132 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 A0A1W2PS18 150 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 OR11H12B2RN74 326 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 WRBO00258 174 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 CHEK1O14757 476 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 IGKV1-17P01599 117 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 CD7P09564 240 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 H2AFB2P0C5Z0 115 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 IGLC1P0CG04 106 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 IAPPP10997 89 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 NKX2-1P43699 371 aaPredicted RBP12.33□□□□□ -0.44
DNMT1-229ENST00000593049 Q8WTZ3 238 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 NPIPB3Q92617 1050 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 SLC35E1Q96K37 410 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 ASCL2Q99929 193 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 ZMAT4Q9H898 229 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 TBC1D24Q9ULP9 559 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 U3KQK5 164 aa12.33□□□□□ -0.44
DNMT1-229ENST00000593049 NPPCP23582 126 aa12.32□□□□□ -0.44
DNMT1-229ENST00000593049 ID3Q02535 119 aa12.32□□□□□ -0.44
DNMT1-229ENST00000593049 TIGITQ495A1 244 aa12.32□□□□□ -0.44
DNMT1-229ENST00000593049 C11orf87Q6NUJ2 197 aa12.32□□□□□ -0.44
DNMT1-229ENST00000593049 SBSPONQ8IVN8 264 aa12.32□□□□□ -0.44
DNMT1-229ENST00000593049 ZNF431Q8TF32 576 aaPredicted RBP12.32□□□□□ -0.44
DNMT1-229ENST00000593049 ACY3Q96HD9 319 aa12.32□□□□□ -0.44
DNMT1-229ENST00000593049 METTL26Q96S19 204 aa12.32□□□□□ -0.44
DNMT1-229ENST00000593049 MAGT1Q9H0U3 335 aa12.32□□□□□ -0.44
DNMT1-229ENST00000593049 OR4C46A6NHA9 309 aa12.31□□□□□ -0.44
DNMT1-229ENST00000593049 FABP1P07148 127 aa12.31□□□□□ -0.44
DNMT1-229ENST00000593049 PAFAH1B2P68402 229 aa12.31□□□□□ -0.44
DNMT1-229ENST00000593049 IAH1Q2TAA2 248 aaPredicted RBP12.31□□□□□ -0.44
DNMT1-229ENST00000593049 OR4D5Q8NGN0 318 aa12.31□□□□□ -0.44
DNMT1-229ENST00000593049 ENKURQ8TC29 256 aa12.31□□□□□ -0.44
DNMT1-229ENST00000593049 RNF2Q99496 336 aa12.31□□□□□ -0.44
DNMT1-229ENST00000593049 VSIRQ9H7M9 311 aa12.31□□□□□ -0.44
DNMT1-229ENST00000593049 PAIP2BQ9ULR5 123 aaKnown RBP12.31□□□□□ -0.44
DNMT1-229ENST00000593049 STRAPQ9Y3F4 350 aaKnown RBP12.31□□□□□ -0.44
DNMT1-229ENST00000593049 SELENOKQ9Y6D0 94 aa12.31□□□□□ -0.44
DNMT1-229ENST00000593049 MPTX1A8MV57 137 aa12.3□□□□□ -0.44
DNMT1-229ENST00000593049 CRYBB3P26998 211 aa12.3□□□□□ -0.44
DNMT1-229ENST00000593049 CMC4P56277 68 aaPredicted RBP12.3□□□□□ -0.44
DNMT1-229ENST00000593049 SPANXN5Q5MJ07 72 aa12.3□□□□□ -0.44
DNMT1-229ENST00000593049 FAM110AQ9BQ89 295 aa12.3□□□□□ -0.44
DNMT1-229ENST00000593049 TOMM40O96008 361 aa12.29□□□□□ -0.44
DNMT1-229ENST00000593049 RD3LP0DJH9 198 aa12.29□□□□□ -0.44
DNMT1-229ENST00000593049 DEFA1P59665 94 aa12.29□□□□□ -0.44
DNMT1-229ENST00000593049 DEFA3P59666 94 aa12.29□□□□□ -0.44
DNMT1-229ENST00000593049 GAMTQ14353 236 aa12.29□□□□□ -0.44
DNMT1-229ENST00000593049 C12orf45Q8N5I9 185 aaPredicted RBP12.29□□□□□ -0.44
DNMT1-229ENST00000593049 DEFB125Q8N687 156 aa12.29□□□□□ -0.44
DNMT1-229ENST00000593049 ZBTB8BQ8NAP8 495 aaPredicted RBP12.29□□□□□ -0.44
DNMT1-229ENST00000593049 GRAMD2BQ96HH9 432 aa12.29□□□□□ -0.44
DNMT1-229ENST00000593049 RAB40CQ96S21 281 aa12.29□□□□□ -0.44
DNMT1-229ENST00000593049 SRD5A3Q9H8P0 318 aa12.29□□□□□ -0.44
DNMT1-229ENST00000593049 IGHV3-49A0A0A0MS15 119 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 ZFP92A6NM28 416 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 IL5P05113 134 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 EIF2B2P49770 351 aaKnown RBP12.28□□□□□ -0.44
DNMT1-229ENST00000593049 TAS2R30P59541 319 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 POLR2GP62487 172 aaKnown RBP eCLIP12.28□□□□□ -0.44
DNMT1-229ENST00000593049 FAM90A2PQ658T7 463 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 TCF24Q7RTU0 167 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 ST8SIA2Q92186 375 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 SMIM8Q96KF7 97 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 SEC22CQ9BRL7 303 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 TM2D3Q9BRN9 247 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 GPN1Q9HCN4 374 aaPredicted RBP12.28□□□□□ -0.44
DNMT1-229ENST00000593049 PSENENQ9NZ42 101 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 GSKIPQ9P0R6 139 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 PFDN2Q9UHV9 154 aa12.28□□□□□ -0.44
DNMT1-229ENST00000593049 TRAV2A0A0B4J234 112 aa12.27□□□□□ -0.45
DNMT1-229ENST00000593049 SSSCA1O60232 199 aa12.27□□□□□ -0.45
DNMT1-229ENST00000593049 HNRNPCP07910 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
DNMT1-229ENST00000593049 NUP62P37198 522 aaPredicted RBP12.27□□□□□ -0.45
DNMT1-229ENST00000593049 HAGHQ16775 308 aa12.27□□□□□ -0.45
DNMT1-229ENST00000593049 LINC00322Q6ZN03 302 aaPredicted RBP12.27□□□□□ -0.45
DNMT1-229ENST00000593049 WWC2-AS2Q96NR7 200 aa12.27□□□□□ -0.45
DNMT1-229ENST00000593049 SPATA25Q9BR10 227 aa12.27□□□□□ -0.45
DNMT1-229ENST00000593049 IGHV3OR16-13A0A075B7E8 117 aa12.26□□□□□ -0.45
DNMT1-229ENST00000593049 IGHV3-74A0A0B4J1X5 117 aa12.26□□□□□ -0.45
DNMT1-229ENST00000593049 C5orf51A6NDU8 294 aa12.26□□□□□ -0.45
DNMT1-229ENST00000593049 SCGB1D2O95969 90 aa12.26□□□□□ -0.45
DNMT1-229ENST00000593049 APOHP02749 345 aaPredicted RBP12.26□□□□□ -0.45
DNMT1-229ENST00000593049 IL4P05112 153 aa12.26□□□□□ -0.45
DNMT1-229ENST00000593049 OR51G1Q8NGK1 321 aa12.26□□□□□ -0.45
DNMT1-229ENST00000593049 RCHY1Q96PM5 261 aa12.26□□□□□ -0.45
DNMT1-229ENST00000593049 TRGV9Q99603 122 aa12.26□□□□□ -0.45
DNMT1-229ENST00000593049 WFDC10AQ9H1F0 79 aa12.26□□□□□ -0.45
DNMT1-229ENST00000593049 RBMY1BA6NDE4 496 aaKnown RBP12.25□□□□□ -0.45
DNMT1-229ENST00000593049 RBMY1EA6NEQ0 496 aaKnown RBP12.25□□□□□ -0.45
DNMT1-229ENST00000593049 PRSS46E5RG02 174 aa12.25□□□□□ -0.45
DNMT1-229ENST00000593049 H3BP45 60 aa12.25□□□□□ -0.45
DNMT1-229ENST00000593049 DNASE2O00115 360 aaPredicted RBP12.25□□□□□ -0.45
DNMT1-229ENST00000593049 PRAF2O60831 178 aa12.25□□□□□ -0.45
DNMT1-229ENST00000593049 TSC22D2O75157 780 aa12.25□□□□□ -0.45
DNMT1-229ENST00000593049 CFDP00746 253 aaPredicted RBP12.25□□□□□ -0.45
DNMT1-229ENST00000593049 RBMY1DP0C7P1 496 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms