RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 RHPN1-AS1Q9BWJ2 59 aa12.63□□□□□ -0.39
RETREG3-210ENST00000590541 A0A0G2JRQ6 117 aa12.62□□□□□ -0.39
RETREG3-210ENST00000590541 C11orf94C9JXX5 98 aa12.62□□□□□ -0.39
RETREG3-210ENST00000590541 CHEK1O14757 476 aa12.62□□□□□ -0.39
RETREG3-210ENST00000590541 TMEM50AO95807 157 aa12.62□□□□□ -0.39
RETREG3-210ENST00000590541 TMEM268Q5VZI3 342 aa12.62□□□□□ -0.39
RETREG3-210ENST00000590541 Q6ZRM9 215 aa12.62□□□□□ -0.39
RETREG3-210ENST00000590541 NOXA1Q86UR1 476 aa12.62□□□□□ -0.39
RETREG3-210ENST00000590541 IGHV3OR16-8A0A075B7F1 116 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 TRAV30A0A087WSZ9 112 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 RPS10-NUDT3A0A1W2PQS6 291 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 ZNF207O43670 478 aaKnown RBP12.61□□□□□ -0.39
RETREG3-210ENST00000590541 ANXA3P12429 323 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 S100A5P33763 92 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 OPRK1P41145 380 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 SRPXP78539 464 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 OR4X1Q8NH49 305 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 LHFPL5Q8TAF8 219 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 ZNF414Q96IQ9 312 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 MCUBQ9NWR8 336 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 CACNG5Q9UF02 275 aa12.61□□□□□ -0.39
RETREG3-210ENST00000590541 CLN5O75503 358 aa12.6□□□□□ -0.39
RETREG3-210ENST00000590541 IGHV3-48P01763 117 aa12.6□□□□□ -0.39
RETREG3-210ENST00000590541 PAFAH1B2P68402 229 aa12.6□□□□□ -0.39
RETREG3-210ENST00000590541 TMEM187Q14656 261 aa12.6□□□□□ -0.39
RETREG3-210ENST00000590541 C2orf83Q53S99 150 aa12.6□□□□□ -0.39
RETREG3-210ENST00000590541 RNASEH2CQ8TDP1 164 aaKnown RBP12.6□□□□□ -0.39
RETREG3-210ENST00000590541 GPR146Q96CH1 333 aa12.6□□□□□ -0.39
RETREG3-210ENST00000590541 RNF2Q99496 336 aa12.6□□□□□ -0.39
RETREG3-210ENST00000590541 HRH4Q9H3N8 390 aa12.6□□□□□ -0.39
RETREG3-210ENST00000590541 TMEM231Q9H6L2 316 aa12.6□□□□□ -0.39
RETREG3-210ENST00000590541 HEYLQ9NQ87 328 aaPredicted RBP12.6□□□□□ -0.39
RETREG3-210ENST00000590541 IGHV4-4A0A075B6R2 117 aa12.59□□□□□ -0.39
RETREG3-210ENST00000590541 A0A0B4J2A0 478 aa12.59□□□□□ -0.39
RETREG3-210ENST00000590541 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
RETREG3-210ENST00000590541 ZNF701M0R085 212 aaPredicted RBP12.59□□□□□ -0.39
RETREG3-210ENST00000590541 SULT1A3P0DMM9 295 aa12.59□□□□□ -0.39
RETREG3-210ENST00000590541 SULT1A4P0DMN0 295 aa12.59□□□□□ -0.39
RETREG3-210ENST00000590541 SLC25A4P12235 298 aa12.59□□□□□ -0.39
RETREG3-210ENST00000590541 TOMM20LQ6UXN7 152 aa12.59□□□□□ -0.39
RETREG3-210ENST00000590541 TOMM5Q8N4H5 51 aa12.59□□□□□ -0.39
RETREG3-210ENST00000590541 Q8NAQ8 132 aa12.59□□□□□ -0.39
RETREG3-210ENST00000590541 SHPKQ9UHJ6 478 aa12.59□□□□□ -0.39
RETREG3-210ENST00000590541 PUS1Q9Y606 427 aaKnown RBP eCLIP12.59□□□□□ -0.39
RETREG3-210ENST00000590541 HSPG2P98160 4391 aa12.58□□□□□ -0.4
RETREG3-210ENST00000590541 A0A1W2PS18 150 aa12.58□□□□□ -0.4
RETREG3-210ENST00000590541 CEBPZOSA8MTT3 80 aa12.58□□□□□ -0.4
RETREG3-210ENST00000590541 CA1P00915 261 aaPredicted RBP12.58□□□□□ -0.4
RETREG3-210ENST00000590541 CCR6P51684 374 aa12.58□□□□□ -0.4
RETREG3-210ENST00000590541 PYDC2Q56P42 97 aa12.58□□□□□ -0.4
RETREG3-210ENST00000590541 FAM90A2PQ658T7 463 aa12.58□□□□□ -0.4
RETREG3-210ENST00000590541 ETFRF1Q6IPR1 90 aa12.58□□□□□ -0.4
RETREG3-210ENST00000590541 LGI3Q8N145 548 aa12.58□□□□□ -0.4
RETREG3-210ENST00000590541 TMEM230Q96A57 120 aa12.58□□□□□ -0.4
RETREG3-210ENST00000590541 FNDC4Q9H6D8 234 aaPredicted RBP12.58□□□□□ -0.4
RETREG3-210ENST00000590541 VSIRQ9H7M9 311 aa12.58□□□□□ -0.4
RETREG3-210ENST00000590541 TRAV2A0A0B4J234 112 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 DUXBA0A1W2PPF3 345 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 AKR1C4P17516 323 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 NPPCP23582 126 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 HLA-DMBP28068 263 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 TFPI2P48307 235 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 ATP5IP56385 69 aaPredicted RBP12.57□□□□□ -0.4
RETREG3-210ENST00000590541 KLF9Q13886 244 aaPredicted RBP12.57□□□□□ -0.4
RETREG3-210ENST00000590541 TMEM128Q5BJH2 165 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 Q6ZTC4 211 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 SLC24A4Q8NFF2 622 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 TRIM63Q969Q1 353 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 NARS2Q96I59 477 aaKnown RBP12.57□□□□□ -0.4
RETREG3-210ENST00000590541 SLC25A21Q9BQT8 299 aaPredicted RBP12.57□□□□□ -0.4
RETREG3-210ENST00000590541 ZFAND3Q9H8U3 227 aa12.57□□□□□ -0.4
RETREG3-210ENST00000590541 TRAV10A0A0B4J240 114 aa12.56□□□□□ -0.4
RETREG3-210ENST00000590541 RBMY1A1P0DJD3 496 aaKnown RBP12.56□□□□□ -0.4
RETREG3-210ENST00000590541 RBMY1CP0DJD4 496 aa12.56□□□□□ -0.4
RETREG3-210ENST00000590541 SMCO1Q147U7 214 aa12.56□□□□□ -0.4
RETREG3-210ENST00000590541 RBMY1FQ15415 496 aaKnown RBP12.56□□□□□ -0.4
RETREG3-210ENST00000590541 TCF24Q7RTU0 167 aa12.56□□□□□ -0.4
RETREG3-210ENST00000590541 U3KQ87 197 aa12.56□□□□□ -0.4
RETREG3-210ENST00000590541 V9GYH0 126 aa12.56□□□□□ -0.4
RETREG3-210ENST00000590541 IGKV3-7A0A075B6H7 116 aa12.55□□□□□ -0.4
RETREG3-210ENST00000590541 A0A1B0GU03 582 aa12.55□□□□□ -0.4
RETREG3-210ENST00000590541 M0R2N4 97 aa12.55□□□□□ -0.4
RETREG3-210ENST00000590541 DFFBO76075 338 aa12.55□□□□□ -0.4
RETREG3-210ENST00000590541 SUPT4H1P63272 117 aaKnown RBP12.55□□□□□ -0.4
RETREG3-210ENST00000590541 ZNF575Q86XF7 245 aa12.55□□□□□ -0.4
RETREG3-210ENST00000590541 POM121L12Q8N7R1 296 aa12.55□□□□□ -0.4
RETREG3-210ENST00000590541 OR1S2Q8NGQ3 325 aa12.55□□□□□ -0.4
RETREG3-210ENST00000590541 METTL26Q96S19 204 aa12.55□□□□□ -0.4
RETREG3-210ENST00000590541 RBM38Q9H0Z9 239 aaKnown RBP12.55□□□□□ -0.4
RETREG3-210ENST00000590541 HSPB7Q9UBY9 170 aa12.55□□□□□ -0.4
RETREG3-210ENST00000590541 IGHV3-49A0A0A0MS15 119 aa12.54□□□□□ -0.4
RETREG3-210ENST00000590541 IGHV4-28A0A0C4DH34 117 aa12.54□□□□□ -0.4
RETREG3-210ENST00000590541 NPY1RP25929 384 aa12.54□□□□□ -0.4
RETREG3-210ENST00000590541 CRYBB3P26998 211 aa12.54□□□□□ -0.4
RETREG3-210ENST00000590541 YPEL3P61236 119 aaPredicted RBP12.54□□□□□ -0.4
RETREG3-210ENST00000590541 MLANAQ16655 118 aa12.54□□□□□ -0.4
RETREG3-210ENST00000590541 SPANXN2Q5MJ10 180 aa12.54□□□□□ -0.4
RETREG3-210ENST00000590541 CCDC190Q86UF4 302 aa12.54□□□□□ -0.4
RETREG3-210ENST00000590541 ST8SIA2Q92186 375 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms