RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 COL6A5A8TX70 2615 aa7.44□□□□□ -1.22
VPS25-205ENST00000590339 IGHV1-69DA0A0B4J2H0 117 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 TCRBV4S1A1TA0A5B7 111 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 FAM74A7A6NL05 159 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 ZFP92A6NM28 416 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 NPIPB5A8MRT5 1133 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 IGHV1-69P01742 117 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 HLA-DRB1P01911 266 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 TMEM11P17152 192 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 CD24P25063 80 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 RHOBP62745 196 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 BTN1A1Q13410 526 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 HES1Q14469 280 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 FAM74A3Q4VXF1 159 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 SOHLH1Q5JUK2 328 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 ASPHD1Q5U4P2 390 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 ETFRF1Q6IPR1 90 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 C12orf54Q6X4T0 127 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 RBMS3Q6XE24 437 aaKnown RBP7.43□□□□□ -1.22
VPS25-205ENST00000590339 CYP2G1PQ6ZSU1 146 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 BCL6BQ8N143 479 aaPredicted RBP7.43□□□□□ -1.22
VPS25-205ENST00000590339 Q8N9W7 124 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 TMEM116Q8NCL8 245 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 OR2T6Q8NHC8 308 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 DUX5Q96PT3 197 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 TMPRSS5Q9H3S3 457 aa7.43□□□□□ -1.22
VPS25-205ENST00000590339 SOX21Q9Y651 276 aaPredicted RBP7.43□□□□□ -1.22
VPS25-205ENST00000590339 TMEM250H0YL14 139 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 I3L2K1 104 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 HMGB3O15347 200 aaKnown RBP7.42□□□□□ -1.22
VPS25-205ENST00000590339 ARL14EPLP0DKL9 152 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 BRS3P32247 399 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 RND2P52198 227 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 HILS1P60008 231 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 CD81P60033 236 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 SELENOTP62341 195 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 MEF2BQ02080 365 aaPredicted RBP7.42□□□□□ -1.22
VPS25-205ENST00000590339 FXYD3Q14802 87 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 KLK9Q2XQG4 91 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 AWAT1Q58HT5 328 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 KLF17Q5JT82 389 aaPredicted RBP7.42□□□□□ -1.22
VPS25-205ENST00000590339 SPATA31B1PQ5VZV4 182 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 RUSC1-AS1Q66K80 236 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 ZNF562Q6V9R5 426 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 SLC35E3Q7Z769 313 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 SIGLECL1Q8N7X8 197 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 OR1L6Q8NGR2 347 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 SUN5Q8TC36 379 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 ABHD5Q8WTS1 349 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 NPIPB3Q92617 1050 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 ARPC1AQ92747 370 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 ACY3Q96HD9 319 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 TRGV9Q99603 122 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 MRPL32Q9BYC8 188 aaKnown RBP7.42□□□□□ -1.22
VPS25-205ENST00000590339 KLK9Q9UKQ9 250 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 FUT9Q9Y231 359 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 ARL2-SNX15V9GYD0 113 aa7.42□□□□□ -1.22
VPS25-205ENST00000590339 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.42□□□□□ -1.225e-7■■□□□ 14.5
VPS25-205ENST00000590339 IGHV7-81A0A0B4J1V7 117 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 TRAV40A0A0B4J280 105 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 A0A1W2PPV4 95 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 CXorf1O96002 111 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 MT-CO2P00403 227 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 FBP1P09467 338 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 FAM106CPP0CH98 169 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 CX3CL1P78423 397 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 RHEBQ15382 184 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 GATAD1Q8WUU5 269 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 MISP3Q96FF7 219 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 JMJD8Q96S16 334 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 RNF2Q99496 336 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 SLC25A33Q9BSK2 321 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 SEPSECSQ9HD40 501 aaKnown RBP7.41□□□□□ -1.22
VPS25-205ENST00000590339 ESM1Q9NQ30 184 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 C1RLQ9NZP8 487 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 WNK2Q9Y3S1 2297 aa7.41□□□□□ -1.22
VPS25-205ENST00000590339 IGLV11-55A0A075B6I3 123 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 H3BQ15 152 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 K7EIM0 57 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 CNIH1O95406 144 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 FSHBP01225 129 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 APELAP0DMC3 54 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 IGHV4-38-2P0DP08 117 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 EGR2P11161 476 aaPredicted RBP7.4□□□□□ -1.22
VPS25-205ENST00000590339 GATA2P23769 480 aaPredicted RBP7.4□□□□□ -1.22
VPS25-205ENST00000590339 GCHFRP30047 84 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 PLP1P60201 277 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 MIR17HGQ75NE6 70 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 CBLN2Q8IUK8 224 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 TTC9CQ8N5M4 171 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 TMEM37Q8WXS4 190 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 ZNF48Q96MX3 618 aaPredicted RBP7.4□□□□□ -1.22
VPS25-205ENST00000590339 TXNDC17Q9BRA2 123 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 WNT10AQ9GZT5 417 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 MEGF9Q9H1U4 602 aa7.4□□□□□ -1.22
VPS25-205ENST00000590339 C7orf77A4D0Y5 90 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 PAGE4O60829 102 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 IGHV3-48P01763 117 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 IGLC1P0CG04 106 aa7.39□□□□□ -1.23
VPS25-205ENST00000590339 BPIFB3P59826 476 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms