RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 NPPCP23582 126 aa20.34■□□□□ 0.85
SMARCD2-210ENST00000584400 Q8WTZ3 238 aa20.34■□□□□ 0.85
SMARCD2-210ENST00000584400 NARS2Q96I59 477 aaKnown RBP20.34■□□□□ 0.85
SMARCD2-210ENST00000584400 METTL26Q96S19 204 aa20.34■□□□□ 0.85
SMARCD2-210ENST00000584400 RNF2Q99496 336 aa20.34■□□□□ 0.85
SMARCD2-210ENST00000584400 DNAH9Q9NYC9 4486 aa20.33■□□□□ 0.85
SMARCD2-210ENST00000584400 PLA2G10O15496 165 aa20.33■□□□□ 0.85
SMARCD2-210ENST00000584400 ANXA7P20073 488 aaKnown RBP20.33■□□□□ 0.85
SMARCD2-210ENST00000584400 OR10J1P30954 320 aa20.33■□□□□ 0.85
SMARCD2-210ENST00000584400 YPEL3P61236 119 aaPredicted RBP20.33■□□□□ 0.85
SMARCD2-210ENST00000584400 PAFAH1B2P68402 229 aa20.33■□□□□ 0.85
SMARCD2-210ENST00000584400 LINC00322Q6ZN03 302 aaPredicted RBP20.33■□□□□ 0.85
SMARCD2-210ENST00000584400 IGHV3-49A0A0A0MS15 119 aa20.32■□□□□ 0.84
SMARCD2-210ENST00000584400 SYNGR2O43760 224 aa20.32■□□□□ 0.84
SMARCD2-210ENST00000584400 IGKV1-17P01599 117 aa20.32■□□□□ 0.84
SMARCD2-210ENST00000584400 IGLC1P0CG04 106 aa20.32■□□□□ 0.84
SMARCD2-210ENST00000584400 GPX4P36969 197 aaPredicted RBP20.32■□□□□ 0.84
SMARCD2-210ENST00000584400 CMC4P56277 68 aaPredicted RBP20.32■□□□□ 0.84
SMARCD2-210ENST00000584400 TIGITQ495A1 244 aa20.32■□□□□ 0.84
SMARCD2-210ENST00000584400 ACY3Q96HD9 319 aa20.32■□□□□ 0.84
SMARCD2-210ENST00000584400 WFDC10AQ9H1F0 79 aa20.32■□□□□ 0.84
SMARCD2-210ENST00000584400 C20orf85Q9H1P6 137 aa20.32■□□□□ 0.84
SMARCD2-210ENST00000584400 NPIPB3Q92617 1050 aa20.31■□□□□ 0.84
SMARCD2-210ENST00000584400 FAM110AQ9BQ89 295 aa20.31■□□□□ 0.84
SMARCD2-210ENST00000584400 VSIRQ9H7M9 311 aa20.31■□□□□ 0.84
SMARCD2-210ENST00000584400 IAPPP10997 89 aa20.3■□□□□ 0.84
SMARCD2-210ENST00000584400 SLC35E1Q96K37 410 aa20.3■□□□□ 0.84
SMARCD2-210ENST00000584400 PTTG2Q9NZH5 202 aa20.3■□□□□ 0.84
SMARCD2-210ENST00000584400 TCF24Q7RTU0 167 aa20.29■□□□□ 0.84
SMARCD2-210ENST00000584400 ST8SIA2Q92186 375 aa20.29■□□□□ 0.84
SMARCD2-210ENST00000584400 GRAMD2BQ96HH9 432 aa20.29■□□□□ 0.84
SMARCD2-210ENST00000584400 PAIP2BQ9ULR5 123 aaKnown RBP20.29■□□□□ 0.84
SMARCD2-210ENST00000584400 IGHV3OR16-13A0A075B7E8 117 aa20.28■□□□□ 0.84
SMARCD2-210ENST00000584400 LOC102724200A0A096LPH7 203 aaPredicted RBP20.28■□□□□ 0.84
SMARCD2-210ENST00000584400 IGHV3-74A0A0B4J1X5 117 aa20.28■□□□□ 0.84
SMARCD2-210ENST00000584400 RBMY1BA6NDE4 496 aaKnown RBP20.28■□□□□ 0.84
SMARCD2-210ENST00000584400 RBMY1EA6NEQ0 496 aaKnown RBP20.28■□□□□ 0.84
SMARCD2-210ENST00000584400 ADAP1O75689 374 aa20.28■□□□□ 0.84
SMARCD2-210ENST00000584400 TCRBP04435 133 aa20.28■□□□□ 0.84
SMARCD2-210ENST00000584400 RBMY1DP0C7P1 496 aaKnown RBP20.28■□□□□ 0.84
SMARCD2-210ENST00000584400 FAM90A2PQ658T7 463 aa20.28■□□□□ 0.84
SMARCD2-210ENST00000584400 WDR12Q9GZL7 423 aaKnown RBP20.28■□□□□ 0.84
SMARCD2-210ENST00000584400 BATF3Q9NR55 127 aa20.28■□□□□ 0.84
SMARCD2-210ENST00000584400 WRBO00258 174 aa20.27■□□□□ 0.84
SMARCD2-210ENST00000584400 CRYBB3P26998 211 aa20.27■□□□□ 0.84
SMARCD2-210ENST00000584400 MZT2BQ6NZ67 158 aa20.27■□□□□ 0.84
SMARCD2-210ENST00000584400 MITD1Q8WV92 249 aa20.27■□□□□ 0.84
SMARCD2-210ENST00000584400 GGTLC1Q9BX51 225 aa20.27■□□□□ 0.84
SMARCD2-210ENST00000584400 MAGT1Q9H0U3 335 aa20.27■□□□□ 0.84
SMARCD2-210ENST00000584400 TOMM40O96008 361 aa20.26■□□□□ 0.83
SMARCD2-210ENST00000584400 FABP1P07148 127 aa20.26■□□□□ 0.83
SMARCD2-210ENST00000584400 RD3LP0DJH9 198 aa20.26■□□□□ 0.83
SMARCD2-210ENST00000584400 NKX2-1P43699 371 aaPredicted RBP20.26■□□□□ 0.83
SMARCD2-210ENST00000584400 RPL11P62913 178 aaKnown RBP20.26■□□□□ 0.83
SMARCD2-210ENST00000584400 ID3Q02535 119 aa20.26■□□□□ 0.83
SMARCD2-210ENST00000584400 ZNF846Q147U1 533 aa20.26■□□□□ 0.83
SMARCD2-210ENST00000584400 UBQLN2Q9UHD9 624 aa20.26■□□□□ 0.83
SMARCD2-210ENST00000584400 COL7A1Q02388 2944 aa20.26■□□□□ 0.83
SMARCD2-210ENST00000584400 IGKV3-7A0A075B6H7 116 aa20.25■□□□□ 0.83
SMARCD2-210ENST00000584400 FAM240BA0A1B0GVZ2 78 aa20.25■□□□□ 0.83
SMARCD2-210ENST00000584400 APOHP02749 345 aaPredicted RBP20.25■□□□□ 0.83
SMARCD2-210ENST00000584400 EIF2B2P49770 351 aaKnown RBP20.25■□□□□ 0.83
SMARCD2-210ENST00000584400 TRAV2A0A0B4J234 112 aa20.24■□□□□ 0.83
SMARCD2-210ENST00000584400 IGHV3-66A0A0C4DH42 116 aa20.24■□□□□ 0.83
SMARCD2-210ENST00000584400 ZFP92A6NM28 416 aa20.24■□□□□ 0.83
SMARCD2-210ENST00000584400 DNASE2O00115 360 aaPredicted RBP20.24■□□□□ 0.83
SMARCD2-210ENST00000584400 DFFBO76075 338 aa20.24■□□□□ 0.83
SMARCD2-210ENST00000584400 TFPI2P48307 235 aa20.24■□□□□ 0.83
SMARCD2-210ENST00000584400 NUDT15Q9NV35 164 aa20.24■□□□□ 0.83
SMARCD2-210ENST00000584400 STRAPQ9Y3F4 350 aaKnown RBP20.24■□□□□ 0.83
SMARCD2-210ENST00000584400 TRAV6A0A075B6T7 132 aa20.23■□□□□ 0.83
SMARCD2-210ENST00000584400 IL4P05112 153 aa20.23■□□□□ 0.83
SMARCD2-210ENST00000584400 HNRNPCP07910 306 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMARCD2-210ENST00000584400 GAMTQ14353 236 aa20.23■□□□□ 0.83
SMARCD2-210ENST00000584400 ODF3L2Q3SX64 289 aa20.23■□□□□ 0.83
SMARCD2-210ENST00000584400 SPANXN5Q5MJ07 72 aa20.23■□□□□ 0.83
SMARCD2-210ENST00000584400 CITED4Q96RK1 184 aa20.23■□□□□ 0.83
SMARCD2-210ENST00000584400 PFDN2Q9UHV9 154 aa20.23■□□□□ 0.83
SMARCD2-210ENST00000584400 MPTX1A8MV57 137 aa20.22■□□□□ 0.83
SMARCD2-210ENST00000584400 APOC4P55056 127 aa20.22■□□□□ 0.83
SMARCD2-210ENST00000584400 IAH1Q2TAA2 248 aaPredicted RBP20.22■□□□□ 0.83
SMARCD2-210ENST00000584400 GBGT1Q8N5D6 347 aa20.22■□□□□ 0.83
SMARCD2-210ENST00000584400 OR51G1Q8NGK1 321 aa20.22■□□□□ 0.83
SMARCD2-210ENST00000584400 OR4D5Q8NGN0 318 aa20.22■□□□□ 0.83
SMARCD2-210ENST00000584400 H2AFB2P0C5Z0 115 aa20.21■□□□□ 0.83
SMARCD2-210ENST00000584400 PSG1P11464 419 aa20.21■□□□□ 0.83
SMARCD2-210ENST00000584400 P2RY1P47900 373 aa20.21■□□□□ 0.83
SMARCD2-210ENST00000584400 AP2S1P53680 142 aaPredicted RBP20.21■□□□□ 0.83
SMARCD2-210ENST00000584400 POLR2GP62487 172 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMARCD2-210ENST00000584400 MS4A6AQ9H2W1 248 aa20.21■□□□□ 0.83
SMARCD2-210ENST00000584400 RABAC1Q9UI14 185 aa20.21■□□□□ 0.83
SMARCD2-210ENST00000584400 HELTA6NFD8 242 aa20.2■□□□□ 0.82
SMARCD2-210ENST00000584400 NUP62P37198 522 aaPredicted RBP20.2■□□□□ 0.82
SMARCD2-210ENST00000584400 ASAH1Q13510 395 aa20.2■□□□□ 0.82
SMARCD2-210ENST00000584400 LILRB2Q8N423 598 aa20.2■□□□□ 0.82
SMARCD2-210ENST00000584400 ZNF431Q8TF32 576 aaPredicted RBP20.2■□□□□ 0.82
SMARCD2-210ENST00000584400 PSENENQ9NZ42 101 aa20.2■□□□□ 0.82
SMARCD2-210ENST00000584400 U3KQE9 123 aa20.2■□□□□ 0.82
SMARCD2-210ENST00000584400 C3orf84H3BNL1 204 aa20.19■□□□□ 0.82
SMARCD2-210ENST00000584400 WFDC3Q8IUB2 231 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms