RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 IGLC1P0CG04 106 aa10.52□□□□□ -0.73
CDK5RAP3-226ENST00000583182 AP2S1P53680 142 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-226ENST00000583182 USF2Q15853 346 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-226ENST00000583182 PLA2G2EQ9NZK7 142 aa10.52□□□□□ -0.73
CDK5RAP3-226ENST00000583182 M0QYG6 137 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 HLA-DRB4P13762 266 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 PGAM2P15259 253 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 RCVRNP35243 200 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 PIGPP57054 158 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 DEFB1P60022 68 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SNRPD3P62318 126 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 DHODHQ02127 395 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 GDF5OSQ5U4N7 250 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 PRSS54Q6PEW0 395 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SNX29P2Q8IUI4 249 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 OR1S2Q8NGQ3 325 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 Q8WTZ3 238 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 FAM210BQ96KR6 192 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SCPEP1Q9HB40 452 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SEPSECSQ9HD40 501 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 ENY2Q9NPA8 101 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 NRN1Q9NPD7 142 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 DKK2Q9UBU2 259 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 HLA-DRB4X5D2U9 266 aa10.51□□□□□ -0.73
CDK5RAP3-226ENST00000583182 IGHV3OR16-12A0A075B7B8 117 aa10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 C3orf85A0A1B0GTC6 90 aa10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 TMEM189A5PLL7 270 aa10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 RND2P52198 227 aa10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 FXYD7P58549 80 aa10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 YPEL3P61236 119 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SP6Q3SY56 376 aa10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 RNF212Q495C1 297 aa10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SOHLH1Q5JUK2 328 aa10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 C1orf134Q5TEV5 83 aa10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 LHFPL1Q86WI0 220 aa10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 ZNF486Q96H40 463 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-226ENST00000583182 RPS10-NUDT3A0A1W2PQS6 291 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 BUB3O43684 328 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 ATG12O94817 140 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 IGKV3-20P01619 116 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 IL4P05112 153 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 OR10J1P30954 320 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 LSM3P62310 102 aaKnown RBP10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 TRIM16LQ309B1 348 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 FAM222AQ5U5X8 452 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SIGLEC15Q6ZMC9 328 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 NIPSNAP3BQ9BS92 247 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 RFNGQ9Y644 331 aa10.49□□□□□ -0.73
CDK5RAP3-226ENST00000583182 APOBP04114 4563 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-226ENST00000583182 NXPH3O95157 252 aa10.48□□□□□ -0.73
CDK5RAP3-226ENST00000583182 HTN3P15516 51 aa10.48□□□□□ -0.73
CDK5RAP3-226ENST00000583182 UCP1P25874 307 aa10.48□□□□□ -0.73
CDK5RAP3-226ENST00000583182 HTR2BP41595 481 aa10.48□□□□□ -0.73
CDK5RAP3-226ENST00000583182 NKX2-1P43699 371 aaPredicted RBP10.48□□□□□ -0.73
CDK5RAP3-226ENST00000583182 AARDQ4LEZ3 155 aa10.48□□□□□ -0.73
CDK5RAP3-226ENST00000583182 ZNF709Q8N972 641 aa10.48□□□□□ -0.73
CDK5RAP3-226ENST00000583182 TMEM170AQ8WVE7 144 aa10.48□□□□□ -0.73
CDK5RAP3-226ENST00000583182 RRNAD1Q96FB5 475 aaKnown RBP10.48□□□□□ -0.73
CDK5RAP3-226ENST00000583182 COMMD3Q9UBI1 195 aa10.48□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SMIM31A0A1B0GVY4 71 aa10.47□□□□□ -0.73
CDK5RAP3-226ENST00000583182 APOA1P02647 267 aa10.47□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SLC25A4P12235 298 aa10.47□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SPCS3P61009 180 aa10.47□□□□□ -0.73
CDK5RAP3-226ENST00000583182 TNP2Q05952 138 aa10.47□□□□□ -0.73
CDK5RAP3-226ENST00000583182 C2orf83Q53S99 150 aa10.47□□□□□ -0.73
CDK5RAP3-226ENST00000583182 Q9H521 79 aa10.47□□□□□ -0.73
CDK5RAP3-226ENST00000583182 TEX48A0A1B0GUV7 120 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 C16orf90A8MZG2 172 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 CDK2AP2O75956 126 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 TOMM40O96008 361 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 OXA1LQ15070 435 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 RNASE12Q5GAN4 147 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 TMEM88Q6PEY1 159 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 GSG1LQ6UXU4 331 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 OR52E5Q8NH55 327 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 RNASE11Q8TAA1 199 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 RNASEH2CQ8TDP1 164 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 NPIPB3Q92617 1050 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 YIPF6Q96EC8 236 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 WDR12Q9GZL7 423 aaKnown RBP10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 SAV1Q9H4B6 383 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 HEYLQ9NQ87 328 aaPredicted RBP10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 COPZ2Q9P299 210 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 KLK11Q9UBX7 282 aa10.46□□□□□ -0.73
CDK5RAP3-226ENST00000583182 GSTZ1O43708 216 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 CD3DP04234 171 aa10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 RD3LP0DJH9 198 aa10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 PSG1P11464 419 aa10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 ELK1P19419 428 aa10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 RNASE10Q5GAN6 216 aaKnown RBP10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 C1orf158Q8N1D5 194 aa10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 MAPKAPK5-AS1Q8N8E1 139 aa10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 SLC24A4Q8NFF2 622 aa10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 OR51G1Q8NGK1 321 aa10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 LHFPL5Q8TAF8 219 aa10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 LINC00052Q96N35 136 aa10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 SLC35B3Q9H1N7 401 aa10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.45□□□□□ -0.74
CDK5RAP3-226ENST00000583182 YTHDF2Q9Y5A9 579 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms