RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 FUT9Q9Y231 359 aa11.58□□□□□ -0.56
MKS1-211ENST00000581761 NPIPB5A8MRT5 1133 aa11.57□□□□□ -0.56
MKS1-211ENST00000581761 SMAD7O15105 426 aaKnown RBP11.57□□□□□ -0.56
MKS1-211ENST00000581761 HLA-DRB1P01911 266 aa11.57□□□□□ -0.56
MKS1-211ENST00000581761 ARL14EPLP0DKL9 152 aa11.57□□□□□ -0.56
MKS1-211ENST00000581761 LOXL1Q08397 574 aaPredicted RBP11.57□□□□□ -0.56
MKS1-211ENST00000581761 AKIRIN2Q53H80 203 aa11.57□□□□□ -0.56
MKS1-211ENST00000581761 FAM78BQ5VT40 261 aa11.57□□□□□ -0.56
MKS1-211ENST00000581761 Q71RC1 249 aaPredicted RBP11.57□□□□□ -0.56
MKS1-211ENST00000581761 MIR17HGQ75NE6 70 aa11.57□□□□□ -0.56
MKS1-211ENST00000581761 MAPK1IP1LQ8NDC0 245 aa11.57□□□□□ -0.56
MKS1-211ENST00000581761 RNF2Q99496 336 aa11.57□□□□□ -0.56
MKS1-211ENST00000581761 TRGV9Q99603 122 aa11.57□□□□□ -0.56
MKS1-211ENST00000581761 TNFRSF19Q9NS68 423 aa11.57□□□□□ -0.56
MKS1-211ENST00000581761 TLN2Q9Y4G6 2542 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 IGHV7-81A0A0B4J1V7 117 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 RNF223E7ERA6 249 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 I3L2K1 104 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 M0R036 132 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 PAGE4O60829 102 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 OR5G3P0C626 314 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 SELENOTP62341 195 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 ZNF90Q03938 601 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 ASPHD1Q5U4P2 390 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 OR1L4Q8NGR5 311 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 NANPQ8TBE9 248 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 C19orf24Q9BVV8 132 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 MEGF9Q9H1U4 602 aa11.56□□□□□ -0.56
MKS1-211ENST00000581761 SEPSECSQ9HD40 501 aaKnown RBP11.56□□□□□ -0.56
MKS1-211ENST00000581761 FAM74A7A6NL05 159 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 DNASE2O00115 360 aaPredicted RBP11.55□□□□□ -0.56
MKS1-211ENST00000581761 COX7A2P2O60397 106 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 GCHFRP30047 84 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 BPIFB3P59826 476 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 MEF2BQ02080 365 aaPredicted RBP11.55□□□□□ -0.56
MKS1-211ENST00000581761 FAM74A3Q4VXF1 159 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 TTC9CQ8N5M4 171 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 TMEM116Q8NCL8 245 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 OR4F5Q8NH21 305 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 OR4X1Q8NH49 305 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 OR4F4Q96R69 305 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 MRPL32Q9BYC8 188 aaKnown RBP11.55□□□□□ -0.56
MKS1-211ENST00000581761 TECRQ9NZ01 308 aaKnown RBP11.55□□□□□ -0.56
MKS1-211ENST00000581761 DOK5Q9P104 306 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 MOB4Q9Y3A3 225 aa11.55□□□□□ -0.56
MKS1-211ENST00000581761 PUS1Q9Y606 427 aaKnown RBP eCLIP11.55□□□□□ -0.56
MKS1-211ENST00000581761 J3QLI3 93 aa11.54□□□□□ -0.56
MKS1-211ENST00000581761 K7EIM0 57 aa11.54□□□□□ -0.56
MKS1-211ENST00000581761 CD81P60033 236 aa11.54□□□□□ -0.56
MKS1-211ENST00000581761 UBE2G2P60604 165 aa11.54□□□□□ -0.56
MKS1-211ENST00000581761 AWAT1Q58HT5 328 aa11.54□□□□□ -0.56
MKS1-211ENST00000581761 KLF17Q5JT82 389 aaPredicted RBP11.54□□□□□ -0.56
MKS1-211ENST00000581761 FAM90A2PQ658T7 463 aa11.54□□□□□ -0.56
MKS1-211ENST00000581761 SUN5Q8TC36 379 aa11.54□□□□□ -0.56
MKS1-211ENST00000581761 RBM14Q96PK6 669 aaKnown RBP11.54□□□□□ -0.56
MKS1-211ENST00000581761 PFDN5Q99471 154 aa11.54□□□□□ -0.56
MKS1-211ENST00000581761 HSPB9Q9BQS6 159 aa11.54□□□□□ -0.56
MKS1-211ENST00000581761 C20orf24Q9BUV8 137 aa11.54□□□□□ -0.56
MKS1-211ENST00000581761 SOX21Q9Y651 276 aaPredicted RBP11.54□□□□□ -0.56
MKS1-211ENST00000581761 IGLV11-55A0A075B6I3 123 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 PSMB11A5LHX3 300 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 C11orf94C9JXX5 98 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 NUPL2O15504 423 aaKnown RBP11.53□□□□□ -0.56
MKS1-211ENST00000581761 NDUFS6O75380 124 aaKnown RBP11.53□□□□□ -0.56
MKS1-211ENST00000581761 LY6G6DO95868 133 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 AVPP01185 164 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 EGR2P11161 476 aaPredicted RBP11.53□□□□□ -0.56
MKS1-211ENST00000581761 TAS2R45P59539 299 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 C10orf113Q5VZT2 155 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 CST9LP1Q5W188 147 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 TMEM219Q86XT9 240 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 C5orf56Q8N8D9 126 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 OR5T1Q8NG75 326 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 TMEM37Q8WXS4 190 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 SSX3Q99909 188 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 DNAJC4Q9NNZ3 241 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 RPS10P5Q9NQ39 176 aa11.53□□□□□ -0.56
MKS1-211ENST00000581761 TMA7Q9Y2S6 64 aaKnown RBP11.53□□□□□ -0.56
MKS1-211ENST00000581761 SH2D7A6NKC9 451 aaPredicted RBP11.52□□□□□ -0.57
MKS1-211ENST00000581761 H3BQ15 152 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 TGFAP01135 160 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 IGLC1P0CG04 106 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 C8orf88P0DMB2 117 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 IGHV4-31P0DP07 118 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 KRTAP1-1Q07627 177 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 LY6EQ16553 131 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 ECSCRQ19T08 205 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 TIGITQ495A1 244 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 UNQ5815/PRO19632Q6UWF5 114 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 SGMS2Q8NHU3 365 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 PIFOQ8TCI5 191 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 TVP23CQ96ET8 276 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 FANCD2OSQ96PS1 177 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 NIPSNAP3BQ9BS92 247 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 TMEM167BQ9NRX6 74 aa11.52□□□□□ -0.57
MKS1-211ENST00000581761 TMEM250H0YL14 139 aa11.51□□□□□ -0.57
MKS1-211ENST00000581761 ATP6V0E1O15342 81 aa11.51□□□□□ -0.57
MKS1-211ENST00000581761 CLN5O75503 358 aa11.51□□□□□ -0.57
MKS1-211ENST00000581761 ATP5G3P48201 142 aa11.51□□□□□ -0.57
MKS1-211ENST00000581761 TMEM88Q6PEY1 159 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms