RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 SPART-AS1P0CW21 52 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 HTN3P15516 51 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 SERPINB10P48595 397 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 EMP1P54849 157 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 RPL8P62917 257 aaKnown RBP4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 HAMPP81172 84 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 LRP2P98164 4655 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 YIF1BQ5BJH7 314 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 FAM222AQ5U5X8 452 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 UBE2UQ5VVX9 321 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 ZNF773Q6PK81 442 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 Q6ZRN7 208 aaPredicted RBP4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 H1FOOQ8IZA3 346 aaPredicted RBP4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 CENPSQ8N2Z9 138 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 OR10J5Q8NHC4 309 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 CMSS1Q9BQ75 279 aaKnown RBP4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 C12orf4Q9NQ89 552 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 XCL2Q9UBD3 114 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 CKLFQ9UBR5 152 aa4.35□□□□□ -1.71
PPP4R1-216ENST00000580283 TRAV2A0A0B4J234 112 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 IGKV1D-13A0A0B4J2D9 117 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 PNMA8CA0A1B0GUJ8 204 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 WBP4O75554 376 aaKnown RBP4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 DCTN3O75935 186 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 UBBP0CG47 229 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 IGKV1-13P0DP09 117 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 HLA-GP17693 338 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 CALB2P22676 271 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 CRHBPP24387 322 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 PAX9P55771 341 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 DLK1P80370 383 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 OXA1LQ15070 435 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 HSP90B2PQ58FF3 399 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 ACTL10Q5JWF8 245 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 SLC25A24Q6NUK1 477 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 OR10G8Q8NGN5 311 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 DCANP1Q8TF63 244 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 RAB40CQ96S21 281 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 ATP6V0BQ99437 205 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 NIPSNAP3BQ9BS92 247 aa4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 RBMX2Q9Y388 322 aaKnown RBP4.34□□□□□ -1.71
PPP4R1-216ENST00000580283 TEX50A0A1B0GTY4 177 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 DNASE2O00115 360 aaPredicted RBP4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 UPK2O00526 184 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 DIRAS3O95661 229 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 HLA-DQB1P01920 261 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 CDK1P06493 297 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 FCGR3AP08637 254 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 ZNF688P0C7X2 276 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 PAFAH1B2P68402 229 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 P2RY14Q15391 338 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 TIMM50Q3ZCQ8 353 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 TOMM20LQ6UXN7 152 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 KCTD9Q7L273 389 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 NKAIN3Q8N8D7 197 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 GDPD1Q8N9F7 314 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 UBAC2Q8NBM4 344 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 DUSP18Q8NEJ0 188 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 VSTM2AQ8TAG5 236 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 MYCBPQ99417 103 aaPredicted RBP4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 NXF2Q9GZY0 626 aaKnown RBP4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 SMPD3Q9NY59 655 aaPredicted RBP4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 BET1LQ9NYM9 111 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 C21orf62Q9NYP8 219 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 THYN1Q9P016 225 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 ELF5Q9UKW6 265 aaPredicted RBP4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 TMED3Q9Y3Q3 217 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 RBM7Q9Y580 266 aaKnown RBP4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 AP4S1Q9Y587 144 aa4.33□□□□□ -1.72
PPP4R1-216ENST00000580283 SNTNA6NMZ2 147 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 I3L2K1 104 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 ST8SIA3O43173 380 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 YIF1AO95070 293 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 IGHV3-48P01763 117 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 PRM2P04554 102 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 SMIM18P0DKX4 95 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 OR13C7P0DN81 318 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 NFYAP23511 347 aaPredicted RBP4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 DCKP27707 260 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 TAS2R43P59537 309 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 DEFB1P60022 68 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 ZNF415Q09FC8 603 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 Q56UQ5 140 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 TMPRSS11AQ6ZMR5 421 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 CBR4Q8N4T8 237 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 C15orf53Q8NAA6 179 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 TSPAN14Q8NG11 270 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 OR4S2Q8NH73 311 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 CENPNQ96H22 339 aaPredicted RBP4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 ATG101Q9BSB4 218 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 Q9H3A6 140 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 Q9H8V8 135 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 RABAC1Q9UI14 185 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 SPATA2Q9UM82 520 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 PRELID3BQ9Y3B1 194 aa4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 F11RQ9Y624 299 aaKnown RBP4.32□□□□□ -1.72
PPP4R1-216ENST00000580283 H3BMM0 161 aa4.31□□□□□ -1.72
PPP4R1-216ENST00000580283 EI24O14681 340 aa4.31□□□□□ -1.72
PPP4R1-216ENST00000580283 CD5P06127 495 aa4.31□□□□□ -1.72
PPP4R1-216ENST00000580283 POU2AF1Q16633 256 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms