RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 K7EPK0 472 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 MYL12BO14950 172 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 IGHMP01871 453 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 ATP5G1P05496 136 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 ADRA2AP08913 450 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 SPNP16150 400 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 CXCL2P19875 107 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 NPY1RP25929 384 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 BLVRBP30043 206 aaPredicted RBP3.01□□□□□ -1.93
NUP88-213ENST00000576862 PKIAP61925 76 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 PPP3R1P63098 170 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 C1DQ13901 141 aaKnown RBP3.01□□□□□ -1.93
NUP88-213ENST00000576862 OR8G1Q15617 311 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 ZNF141Q15928 474 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 OCIAD2Q56VL3 154 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 TMEM69Q5SWH9 247 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 C12orf73Q69YU5 71 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 ZNF620Q6ZNG0 422 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 SHISA6Q6ZSJ9 500 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 DEFB125Q8N687 156 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 NUP35Q8NFH5 326 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 OR8D4Q8NGM9 314 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 ZNF721Q8TF20 911 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 CT55Q8WUE5 264 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 MBD3L1Q8WWY6 194 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 SLC7A6Q92536 515 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 ARL11Q969Q4 196 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 REEP6Q96HR9 211 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 METTL26Q96S19 204 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 PRSS27Q9BQR3 290 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 OR8D2Q9GZM6 311 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 RNASE7Q9H1E1 156 aaKnown RBP3.01□□□□□ -1.93
NUP88-213ENST00000576862 DEFB127Q9H1M4 99 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 CACYBPQ9HB71 228 aaKnown RBP3.01□□□□□ -1.93
NUP88-213ENST00000576862 TMEM38BQ9NVV0 291 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 XCL2Q9UBD3 114 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 LAMTOR3Q9UHA4 124 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 PLXND1Q9Y4D7 1925 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 MYO10Q9HD67 2058 aa3□□□□□ -1.93
NUP88-213ENST00000576862 SPAG17Q6Q759 2223 aa3□□□□□ -1.93
NUP88-213ENST00000576862 IGKV1D-42A0A075B6H8 117 aa3□□□□□ -1.93
NUP88-213ENST00000576862 IGLV1-36A0A0B4J1U3 117 aa3□□□□□ -1.93
NUP88-213ENST00000576862 TRAV8-6A0A0B4J262 113 aa3□□□□□ -1.93
NUP88-213ENST00000576862 C12orf77C9JDV5 145 aa3□□□□□ -1.93
NUP88-213ENST00000576862 F6UZH7 168 aa3□□□□□ -1.93
NUP88-213ENST00000576862 CDC42EP2O14613 210 aa3□□□□□ -1.93
NUP88-213ENST00000576862 CDS2O95674 445 aa3□□□□□ -1.93
NUP88-213ENST00000576862 SCTP09683 121 aa3□□□□□ -1.93
NUP88-213ENST00000576862 OR5H8P0DN80 308 aa3□□□□□ -1.93
NUP88-213ENST00000576862 CCL4P13236 92 aa3□□□□□ -1.93
NUP88-213ENST00000576862 CNTFRP26992 372 aa3□□□□□ -1.93
NUP88-213ENST00000576862 SRIP30626 198 aa3□□□□□ -1.93
NUP88-213ENST00000576862 PRSS3P35030 304 aa3□□□□□ -1.93
NUP88-213ENST00000576862 NMUP48645 174 aa3□□□□□ -1.93
NUP88-213ENST00000576862 PSMB2P49721 201 aa3□□□□□ -1.93
NUP88-213ENST00000576862 EIF2B2P49770 351 aaKnown RBP3□□□□□ -1.93
NUP88-213ENST00000576862 EMP1P54849 157 aa3□□□□□ -1.93
NUP88-213ENST00000576862 FXYD6P3P58550 94 aa3□□□□□ -1.93
NUP88-213ENST00000576862 TAS2R30P59541 319 aa3□□□□□ -1.93
NUP88-213ENST00000576862 SNRPGP62308 76 aaKnown RBP3□□□□□ -1.93
NUP88-213ENST00000576862 DCDP81605 110 aaKnown RBP3□□□□□ -1.93
NUP88-213ENST00000576862 PLCXD2Q0VAA5 305 aa3□□□□□ -1.93
NUP88-213ENST00000576862 PRDX4Q13162 271 aa3□□□□□ -1.93
NUP88-213ENST00000576862 SSX1Q16384 188 aa3□□□□□ -1.93
NUP88-213ENST00000576862 SCGB2B2Q4G0G5 96 aa3□□□□□ -1.93
NUP88-213ENST00000576862 SPATA31B1PQ5VZV4 182 aa3□□□□□ -1.93
NUP88-213ENST00000576862 CNIH2Q6PI25 160 aa3□□□□□ -1.93
NUP88-213ENST00000576862 CLEC19AQ6UXS0 136 aa3□□□□□ -1.93
NUP88-213ENST00000576862 C16orf47Q6ZP98 133 aaPredicted RBP3□□□□□ -1.93
NUP88-213ENST00000576862 LINC00471Q8N535 108 aa3□□□□□ -1.93
NUP88-213ENST00000576862 PLPP5Q8NEB5 264 aa3□□□□□ -1.93
NUP88-213ENST00000576862 OR10J6PQ8NGY7 276 aa3□□□□□ -1.93
NUP88-213ENST00000576862 TERB2Q8NHR7 220 aa3□□□□□ -1.93
NUP88-213ENST00000576862 PFN4Q8NHR9 129 aa3□□□□□ -1.93
NUP88-213ENST00000576862 FRZBQ92765 325 aa3□□□□□ -1.93
NUP88-213ENST00000576862 GPR146Q96CH1 333 aa3□□□□□ -1.93
NUP88-213ENST00000576862 ISOC1Q96CN7 298 aa3□□□□□ -1.93
NUP88-213ENST00000576862 ZNF649Q9BS31 505 aa3□□□□□ -1.93
NUP88-213ENST00000576862 GNB1LQ9BYB4 327 aa3□□□□□ -1.93
NUP88-213ENST00000576862 LINC00470Q9BZP3 86 aa3□□□□□ -1.93
NUP88-213ENST00000576862 UQCC1Q9NVA1 299 aa3□□□□□ -1.93
NUP88-213ENST00000576862 ERG28Q9UKR5 140 aa3□□□□□ -1.93
NUP88-213ENST00000576862 PKIGQ9Y2B9 76 aa3□□□□□ -1.93
NUP88-213ENST00000576862 ZFP30Q9Y2G7 519 aa3□□□□□ -1.93
NUP88-213ENST00000576862 TPRKBQ9Y3C4 175 aa3□□□□□ -1.93
NUP88-213ENST00000576862 ANKRD12Q6UB98 2062 aa3□□□□□ -1.93
NUP88-213ENST00000576862 LRP4O75096 1905 aa2.99□□□□□ -1.93
NUP88-213ENST00000576862 DOCK9Q9BZ29 2069 aa2.99□□□□□ -1.93
NUP88-213ENST00000576862 TRAV26-2A0A0B4J265 109 aa2.99□□□□□ -1.93
NUP88-213ENST00000576862 IGKV1D-13A0A0B4J2D9 117 aa2.99□□□□□ -1.93
NUP88-213ENST00000576862 FAM236DA0A1B0GTK5 79 aa2.99□□□□□ -1.93
NUP88-213ENST00000576862 RBMY1BA6NDE4 496 aaKnown RBP2.99□□□□□ -1.93
NUP88-213ENST00000576862 RBMY1EA6NEQ0 496 aaKnown RBP2.99□□□□□ -1.93
NUP88-213ENST00000576862 OR4C45A6NMZ5 311 aa2.99□□□□□ -1.93
NUP88-213ENST00000576862 CORTO00230 105 aa2.99□□□□□ -1.93
NUP88-213ENST00000576862 XKRYO14609 159 aa2.99□□□□□ -1.93
NUP88-213ENST00000576862 TCF21O43680 179 aa2.99□□□□□ -1.93
NUP88-213ENST00000576862 MRPS14O60783 128 aaKnown RBP2.99□□□□□ -1.93
NUP88-213ENST00000576862 SS18L1O75177 396 aaPredicted RBP2.99□□□□□ -1.93
NUP88-213ENST00000576862 DHRS3O75911 302 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms