RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 LOXL1Q08397 574 aaPredicted RBP22.45■■□□□ 1.19
CTDNEP1-210ENST00000574322 AWAT1Q58HT5 328 aa22.45■■□□□ 1.19
CTDNEP1-210ENST00000574322 IQCF2Q8IXL9 164 aa22.45■■□□□ 1.19
CTDNEP1-210ENST00000574322 DNAJC4Q9NNZ3 241 aa22.45■■□□□ 1.19
CTDNEP1-210ENST00000574322 TECRQ9NZ01 308 aaKnown RBP22.45■■□□□ 1.19
CTDNEP1-210ENST00000574322 EGR2P11161 476 aaPredicted RBP22.45■■□□□ 1.18
CTDNEP1-210ENST00000574322 RHEBQ15382 184 aa22.45■■□□□ 1.18
CTDNEP1-210ENST00000574322 MIR17HGQ75NE6 70 aa22.45■■□□□ 1.18
CTDNEP1-210ENST00000574322 OR1L4Q8NGR5 311 aa22.45■■□□□ 1.18
CTDNEP1-210ENST00000574322 PFDN5Q99471 154 aa22.45■■□□□ 1.18
CTDNEP1-210ENST00000574322 RASL11BQ9BPW5 248 aa22.45■■□□□ 1.18
CTDNEP1-210ENST00000574322 TEX15Q9BXT5 2789 aa22.44■■□□□ 1.18
CTDNEP1-210ENST00000574322 K7EIM0 57 aa22.44■■□□□ 1.18
CTDNEP1-210ENST00000574322 IGHV4-38-2P0DP08 117 aa22.44■■□□□ 1.18
CTDNEP1-210ENST00000574322 PIFOQ8TCI5 191 aa22.44■■□□□ 1.18
CTDNEP1-210ENST00000574322 NIPSNAP3BQ9BS92 247 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 PUS1Q9Y606 427 aaKnown RBP eCLIP22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 IGLV11-55A0A075B6I3 123 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 IGHV3OR16-10A0A075B7F0 116 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 C7orf77A4D0Y5 90 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 CLN5O75503 358 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 CEBPGP53567 150 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 TAS2R45P59539 299 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 KLK9Q2XQG4 91 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 BRD3OSQ6XYD6 125 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 PQLC2Q6ZP29 291 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 KLK9Q9UKQ9 250 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 ARL2-SNX15V9GYD0 113 aa22.43■■□□□ 1.18
CTDNEP1-210ENST00000574322 A0A0U1RQK1 487 aa22.42■■□□□ 1.18
CTDNEP1-210ENST00000574322 M0R036 132 aa22.42■■□□□ 1.18
CTDNEP1-210ENST00000574322 RBM14Q96PK6 669 aaKnown RBP22.42■■□□□ 1.18
CTDNEP1-210ENST00000574322 FANCD2OSQ96PS1 177 aa22.42■■□□□ 1.18
CTDNEP1-210ENST00000574322 C11orf94C9JXX5 98 aa22.41■■□□□ 1.18
CTDNEP1-210ENST00000574322 J3QLI3 93 aa22.41■■□□□ 1.18
CTDNEP1-210ENST00000574322 BPIFB3P59826 476 aa22.41■■□□□ 1.18
CTDNEP1-210ENST00000574322 PLP1P60201 277 aa22.41■■□□□ 1.18
CTDNEP1-210ENST00000574322 MAPK1IP1LQ8NDC0 245 aa22.41■■□□□ 1.18
CTDNEP1-210ENST00000574322 OR4F5Q8NH21 305 aa22.41■■□□□ 1.18
CTDNEP1-210ENST00000574322 TVP23CQ96ET8 276 aa22.41■■□□□ 1.18
CTDNEP1-210ENST00000574322 OR4F4Q96R69 305 aa22.41■■□□□ 1.18
CTDNEP1-210ENST00000574322 ELOA3CA0A087WX78 387 aaPredicted RBP22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 PDE6DO43924 150 aa22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 IGLC1P0CG04 106 aa22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 C8orf88P0DMB2 117 aa22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 KLF17Q5JT82 389 aaPredicted RBP22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 PATE2Q6UY27 113 aa22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 SGMS2Q8NHU3 365 aa22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 OTOGQ6ZRI0 2925 aa22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.4■■□□□ 1.185e-8■□□□□ 9.7
CTDNEP1-210ENST00000574322 NUPL2O15504 423 aaKnown RBP22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 TMEM88Q6PEY1 159 aa22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 CBLN2Q8IUK8 224 aa22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 C5orf56Q8N8D9 126 aa22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 ZNF48Q96MX3 618 aaPredicted RBP22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 TMEM167BQ9NRX6 74 aa22.4■■□□□ 1.18
CTDNEP1-210ENST00000574322 ITPR3Q14573 2671 aa22.39■■□□□ 1.17
CTDNEP1-210ENST00000574322 IGHV3-21A0A0B4J1V1 117 aa22.39■■□□□ 1.17
CTDNEP1-210ENST00000574322 COX7A2P2O60397 106 aa22.39■■□□□ 1.17
CTDNEP1-210ENST00000574322 PNRC1Q12796 327 aaPredicted RBP22.39■■□□□ 1.17
CTDNEP1-210ENST00000574322 C10orf113Q5VZT2 155 aa22.39■■□□□ 1.17
CTDNEP1-210ENST00000574322 ZNF503Q96F45 646 aa22.39■■□□□ 1.17
CTDNEP1-210ENST00000574322 HSPB9Q9BQS6 159 aa22.39■■□□□ 1.17
CTDNEP1-210ENST00000574322 RPS10P5Q9NQ39 176 aa22.39■■□□□ 1.17
CTDNEP1-210ENST00000574322 AVPP01185 164 aa22.38■■□□□ 1.17
CTDNEP1-210ENST00000574322 CIARTQ8N365 385 aaPredicted RBP22.38■■□□□ 1.17
CTDNEP1-210ENST00000574322 FAM167A-AS1Q96KT0 104 aa22.38■■□□□ 1.17
CTDNEP1-210ENST00000574322 TMEM68Q96MH6 324 aa22.38■■□□□ 1.17
CTDNEP1-210ENST00000574322 TUBA4BQ9H853 241 aa22.38■■□□□ 1.17
CTDNEP1-210ENST00000574322 SMCO4Q9NRQ5 59 aa22.38■■□□□ 1.17
CTDNEP1-210ENST00000574322 MOB4Q9Y3A3 225 aa22.38■■□□□ 1.17
CTDNEP1-210ENST00000574322 F6UZH7 168 aa22.37■■□□□ 1.17
CTDNEP1-210ENST00000574322 C20orf24Q9BUV8 137 aa22.37■■□□□ 1.17
CTDNEP1-210ENST00000574322 SMAD7O15105 426 aaKnown RBP22.36■■□□□ 1.17
CTDNEP1-210ENST00000574322 UBE2G2P60604 165 aa22.36■■□□□ 1.17
CTDNEP1-210ENST00000574322 FAM110DQ8TAY7 271 aaPredicted RBP22.36■■□□□ 1.17
CTDNEP1-210ENST00000574322 SDF2L1Q9HCN8 221 aa22.36■■□□□ 1.17
CTDNEP1-210ENST00000574322 THYN1Q9P016 225 aa22.36■■□□□ 1.17
CTDNEP1-210ENST00000574322 CREBBPQ92793 2442 aa22.35■■□□□ 1.17
CTDNEP1-210ENST00000574322 ZNF727A8MUV8 499 aa22.35■■□□□ 1.17
CTDNEP1-210ENST00000574322 B4DEV8 164 aa22.35■■□□□ 1.17
CTDNEP1-210ENST00000574322 CST9LP1Q5W188 147 aa22.35■■□□□ 1.17
CTDNEP1-210ENST00000574322 SSX3Q99909 188 aa22.35■■□□□ 1.17
CTDNEP1-210ENST00000574322 SLC25A2Q9BXI2 301 aa22.35■■□□□ 1.17
CTDNEP1-210ENST00000574322 TMA7Q9Y2S6 64 aaKnown RBP22.35■■□□□ 1.17
CTDNEP1-210ENST00000574322 A0A087WWC5 75 aa22.34■■□□□ 1.17
CTDNEP1-210ENST00000574322 IGKV1-17P01599 117 aa22.34■■□□□ 1.17
CTDNEP1-210ENST00000574322 ATP5G3P48201 142 aa22.34■■□□□ 1.17
CTDNEP1-210ENST00000574322 YTHDF2Q9Y5A9 579 aaKnown RBP22.34■■□□□ 1.17
CTDNEP1-210ENST00000574322 FABP1P07148 127 aa22.34■■□□□ 1.17
CTDNEP1-210ENST00000574322 HIST1H1BP16401 226 aaKnown RBP22.34■■□□□ 1.17
CTDNEP1-210ENST00000574322 NPPCP23582 126 aa22.34■■□□□ 1.17
CTDNEP1-210ENST00000574322 MORN5Q5VZ52 161 aa22.34■■□□□ 1.17
CTDNEP1-210ENST00000574322 SMIM7Q9BQ49 75 aa22.34■■□□□ 1.17
CTDNEP1-210ENST00000574322 PARLQ9H300 379 aa22.34■■□□□ 1.17
CTDNEP1-210ENST00000574322 NAT8Q9UHE5 227 aa22.34■■□□□ 1.17
CTDNEP1-210ENST00000574322 TRAV30A0A087WSZ9 112 aa22.33■■□□□ 1.17
CTDNEP1-210ENST00000574322 ZNF355PQ9NSJ1 428 aa22.33■■□□□ 1.17
CTDNEP1-210ENST00000574322 DOK5Q9P104 306 aa22.33■■□□□ 1.17
CTDNEP1-210ENST00000574322 ATP6V0E1O15342 81 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms