RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 FNDC4Q9H6D8 234 aaPredicted RBP8.59□□□□□ -1.03
PRPF8-208ENST00000573716 ENY2Q9NPA8 101 aa8.59□□□□□ -1.03
PRPF8-208ENST00000573716 NRN1Q9NPD7 142 aa8.59□□□□□ -1.03
PRPF8-208ENST00000573716 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
PRPF8-208ENST00000573716 IGKV1-39P01597 117 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 IGKV1-17P01599 117 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 IGKV1D-39P04432 117 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 CLEC2LP0C7M8 214 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 RNASE2P10153 161 aaKnown RBP8.58□□□□□ -1.04
PRPF8-208ENST00000573716 KRTAP10-2P60368 255 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 DLK1P80370 383 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 RRN3P1Q2M238 152 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 SIGLEC15Q6ZMC9 328 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 OR6F1Q8NGZ6 308 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 OR4X1Q8NH49 305 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 Q8WTZ3 238 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 PDCD10Q9BUL8 212 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 SLC35B3Q9H1N7 401 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 U3KQE9 123 aa8.58□□□□□ -1.04
PRPF8-208ENST00000573716 APOBP04114 4563 aaKnown RBP8.58□□□□□ -1.04
PRPF8-208ENST00000573716 A0A0A6YYH2 397 aa8.57□□□□□ -1.04
PRPF8-208ENST00000573716 A6NJ64 397 aa8.57□□□□□ -1.04
PRPF8-208ENST00000573716 SDC2P34741 201 aa8.57□□□□□ -1.04
PRPF8-208ENST00000573716 ETV6P41212 452 aa8.57□□□□□ -1.04
PRPF8-208ENST00000573716 NKX2-1P43699 371 aaPredicted RBP8.57□□□□□ -1.04
PRPF8-208ENST00000573716 CCL18P55774 89 aa8.57□□□□□ -1.04
PRPF8-208ENST00000573716 TAS2R46P59540 309 aa8.57□□□□□ -1.04
PRPF8-208ENST00000573716 TMEM208Q9BTX3 173 aa8.57□□□□□ -1.04
PRPF8-208ENST00000573716 MAGT1Q9H0U3 335 aa8.57□□□□□ -1.04
PRPF8-208ENST00000573716 TRAV30A0A087WSZ9 112 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 F5H768 121 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 IL4P05112 153 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 DEFB130BP0DP73 79 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 DEFB130AP0DP74 79 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 PSMB9P28065 219 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 AKR1C2P52895 323 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 TSPAN5P62079 268 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 DHODHQ02127 395 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 CLINT1Q14677 625 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 OR1S2Q8NGQ3 325 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 COQ8AQ8NI60 647 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 SSR3Q9UNL2 185 aa8.56□□□□□ -1.04
PRPF8-208ENST00000573716 M0QYG6 137 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 EBAG9O00559 213 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 HLA-DMAP28067 261 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 OR10J1P30954 320 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 HRH1P35367 487 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 RORCP51449 518 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 RND2P52198 227 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 TAS2R20P59543 309 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 USF2Q15853 346 aaPredicted RBP8.55□□□□□ -1.04
PRPF8-208ENST00000573716 LPCAT3Q6P1A2 487 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 C1orf158Q8N1D5 194 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 ZNF709Q8N972 641 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 SAV1Q9H4B6 383 aaPredicted RBP8.55□□□□□ -1.04
PRPF8-208ENST00000573716 SEPSECSQ9HD40 501 aaKnown RBP8.55□□□□□ -1.04
PRPF8-208ENST00000573716 FAM212BQ9NTI7 297 aaPredicted RBP8.55□□□□□ -1.04
PRPF8-208ENST00000573716 LINC00588Q9Y4M8 146 aa8.55□□□□□ -1.04
PRPF8-208ENST00000573716 A0A0B4J293 547 aa8.54□□□□□ -1.04
PRPF8-208ENST00000573716 GSTZ1O43708 216 aaPredicted RBP8.54□□□□□ -1.04
PRPF8-208ENST00000573716 IGKV1-5P01602 117 aa8.54□□□□□ -1.04
PRPF8-208ENST00000573716 IGLC1P0CG04 106 aa8.54□□□□□ -1.04
PRPF8-208ENST00000573716 ID1P41134 155 aa8.54□□□□□ -1.04
PRPF8-208ENST00000573716 SCAND1P57086 179 aa8.54□□□□□ -1.04
PRPF8-208ENST00000573716 PSG9Q00887 426 aa8.54□□□□□ -1.04
PRPF8-208ENST00000573716 FOXI2Q6ZQN5 318 aa8.54□□□□□ -1.04
PRPF8-208ENST00000573716 RNASE11Q8TAA1 199 aaKnown RBP8.54□□□□□ -1.04
PRPF8-208ENST00000573716 CNBD2Q96M20 576 aa8.54□□□□□ -1.04
PRPF8-208ENST00000573716 BLOC1S6Q9UL45 172 aa8.54□□□□□ -1.04
PRPF8-208ENST00000573716 LOC100506127A0A0U1RQW1 187 aa8.53□□□□□ -1.04
PRPF8-208ENST00000573716 ZNF705GA8MUZ8 300 aaPredicted RBP8.53□□□□□ -1.04
PRPF8-208ENST00000573716 F6UB75 175 aa8.53□□□□□ -1.04
PRPF8-208ENST00000573716 PRM2P04554 102 aa8.53□□□□□ -1.04
PRPF8-208ENST00000573716 PGAM2P15259 253 aa8.53□□□□□ -1.04
PRPF8-208ENST00000573716 RPL5P46777 297 aaKnown RBP8.53□□□□□ -1.04
PRPF8-208ENST00000573716 FAM78BQ5VT40 261 aa8.53□□□□□ -1.04
PRPF8-208ENST00000573716 EBLN2Q6P2I7 272 aa8.53□□□□□ -1.04
PRPF8-208ENST00000573716 SSX7Q7RTT5 188 aa8.53□□□□□ -1.04
PRPF8-208ENST00000573716 S100A16Q96FQ6 103 aaKnown RBP8.53□□□□□ -1.04
PRPF8-208ENST00000573716 ACY3Q96HD9 319 aa8.53□□□□□ -1.04
PRPF8-208ENST00000573716 FAM210AQ96ND0 272 aa8.53□□□□□ -1.04
PRPF8-208ENST00000573716 PBDC1Q9BVG4 233 aa8.53□□□□□ -1.04
PRPF8-208ENST00000573716 WDR12Q9GZL7 423 aaKnown RBP8.53□□□□□ -1.04
PRPF8-208ENST00000573716 SCPEP1Q9HB40 452 aa8.53□□□□□ -1.04
PRPF8-208ENST00000573716 INS-IGF2F8WCM5 200 aa8.52□□□□□ -1.05
PRPF8-208ENST00000573716 BUB3O43684 328 aa8.52□□□□□ -1.05
PRPF8-208ENST00000573716 RD3LP0DJH9 198 aa8.52□□□□□ -1.05
PRPF8-208ENST00000573716 FUSP35637 526 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRPF8-208ENST00000573716 ALDH3B2P48448 385 aa8.52□□□□□ -1.05
PRPF8-208ENST00000573716 YPEL3P61236 119 aaPredicted RBP8.52□□□□□ -1.05
PRPF8-208ENST00000573716 TTC32Q5I0X7 151 aa8.52□□□□□ -1.05
PRPF8-208ENST00000573716 TMEM69Q5SWH9 247 aa8.52□□□□□ -1.05
PRPF8-208ENST00000573716 Q5VSD8 79 aa8.52□□□□□ -1.05
PRPF8-208ENST00000573716 PRSS54Q6PEW0 395 aa8.52□□□□□ -1.05
PRPF8-208ENST00000573716 OR51G1Q8NGK1 321 aa8.52□□□□□ -1.05
PRPF8-208ENST00000573716 KRTAP1-5Q9BYS1 174 aa8.52□□□□□ -1.05
PRPF8-208ENST00000573716 Q9H8V8 135 aa8.52□□□□□ -1.05
PRPF8-208ENST00000573716 HEYLQ9NQ87 328 aaPredicted RBP8.52□□□□□ -1.05
PRPF8-208ENST00000573716 NAT1P18440 290 aa8.51□□□□□ -1.05
PRPF8-208ENST00000573716 PI3P19957 117 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms