RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 NPPCP23582 126 aa9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 CMC4P56277 68 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 TNFRSF9Q07011 255 aa9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 RBMS2Q15434 407 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 TIGITQ495A1 244 aa9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 C2orf83Q53S99 150 aa9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 METTL26Q96S19 204 aa9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 TMEM231Q9H6L2 316 aa9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 HSPB7Q9UBY9 170 aa9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 CSMD3Q7Z407 3707 aa9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 TRAV30A0A087WSZ9 112 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 UBE2CO00762 179 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 NDUFB6O95139 128 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 IFNA10P01566 189 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 CD5P06127 495 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 HOXB5P09067 269 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 NPY1RP25929 384 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 BTCP35070 178 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 RND2P52198 227 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 FAM90A2PQ658T7 463 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 Q6ZWC4 215 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 LILRB2Q8N423 598 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 DTD1Q8TEA8 209 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 NARS2Q96I59 477 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 MS4A6AQ9H2W1 248 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 VSIRQ9H7M9 311 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 MAP6D1Q9H9H5 199 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 RABAC1Q9UI14 185 aa9.4□□□□□ -0.9
NPLOC4-213ENST00000573519 KIR2DL5BA0A0G2JN68 375 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 KIR2DL5BA0A0G2JPC4 375 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 A0A0J9YWU9 116 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 A0A1W2PS18 150 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 CENPXA8MT69 81 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 PLA2G10O15496 165 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 SLC25A4P12235 298 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 ANXA7P20073 488 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 OR10J1P30954 320 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 CNPY1Q3B7I2 92 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 KIR2DL5AQ8N109 375 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 LRTM2Q8N967 370 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 OR1S2Q8NGQ3 325 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 KIR2DL5BQ8NHK3 375 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 RNASEH2CQ8TDP1 164 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 ACY3Q96HD9 319 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 CACFD1Q9UGQ2 172 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 TP53TG1Q9Y2A0 90 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 STARD9Q9P2P6 4700 aa9.39□□□□□ -0.91
NPLOC4-213ENST00000573519 DUXBA0A1W2PPF3 345 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 C9orf170A2RU37 121 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 A6NHS1 94 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 PITX3O75364 302 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 IGKV1-17P01599 117 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 IAPPP10997 89 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 PMS2P11Q13670 270 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 GGNBP1Q5YKI7 109 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 LEMD1Q68G75 181 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 ETFRF1Q6IPR1 90 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 PRSS54Q6PEW0 395 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 LYG2Q86SG7 212 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 NOXA1Q86UR1 476 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 STXBP6Q8NFX7 210 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 Q8WTZ3 238 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 GRAMD2BQ96HH9 432 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 C7orf50Q9BRJ6 194 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 MAGT1Q9H0U3 335 aa9.38□□□□□ -0.91
NPLOC4-213ENST00000573519 DYNC2H1Q8NCM8 4307 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 CXorf65A6NEN9 183 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 MPTX1A8MV57 137 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 ADAP1O75689 374 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 JTBO76095 146 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 OR4E1P0C645 316 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 IGLC1P0CG04 106 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 CRYBB3P26998 211 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 P2RY1P47900 373 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 DEFB131AP59861 70 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 UBE2MP61081 183 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 DHRS2Q13268 280 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 FAM24BQ8N5W8 94 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 NPIPB3Q92617 1050 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 RNF183Q96D59 192 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 CSTL1Q9H114 145 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 TMED3Q9Y3Q3 217 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 U3KQ87 197 aa9.37□□□□□ -0.91
NPLOC4-213ENST00000573519 PIGBOS1A0A0B4J2F0 54 aa9.36□□□□□ -0.91
NPLOC4-213ENST00000573519 LYRM1O43325 122 aa9.36□□□□□ -0.91
NPLOC4-213ENST00000573519 IFNA4P05014 189 aa9.36□□□□□ -0.91
NPLOC4-213ENST00000573519 IL4P05112 153 aa9.36□□□□□ -0.91
NPLOC4-213ENST00000573519 SLC25A6P12236 298 aa9.36□□□□□ -0.91
NPLOC4-213ENST00000573519 C4orf46Q504U0 113 aa9.36□□□□□ -0.91
NPLOC4-213ENST00000573519 PAIP2BQ9ULR5 123 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-213ENST00000573519 LYSTQ99698 3801 aa9.35□□□□□ -0.91
NPLOC4-213ENST00000573519 TRAV2A0A0B4J234 112 aa9.35□□□□□ -0.91
NPLOC4-213ENST00000573519 CA1P00915 261 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-213ENST00000573519 HNRNPCP07910 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
NPLOC4-213ENST00000573519 EIF2B2P49770 351 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-213ENST00000573519 YPEL3P61236 119 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-213ENST00000573519 STHQ8IWL8 128 aa9.35□□□□□ -0.91
NPLOC4-213ENST00000573519 COQ8AQ8NI60 647 aa9.35□□□□□ -0.91
NPLOC4-213ENST00000573519 TENM2Q9NT68 2774 aa9.35□□□□□ -0.91
NPLOC4-213ENST00000573519 RYR2Q92736 4967 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms