RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 SLURP1P55000 103 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 DLK1P80370 383 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 STX12Q86Y82 276 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 UBAC2Q8NBM4 344 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 DLX4Q92988 240 aaPredicted RBP12.79□□□□□ -0.36
CLN6-208ENST00000567060 SLC25A31Q9H0C2 315 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 SIGLEC8Q9NYZ4 499 aa12.79□□□□□ -0.36
CLN6-208ENST00000567060 A8MWP6 167 aa12.78□□□□□ -0.36
CLN6-208ENST00000567060 ADMP35318 185 aa12.78□□□□□ -0.36
CLN6-208ENST00000567060 BCAP31P51572 246 aa12.78□□□□□ -0.36
CLN6-208ENST00000567060 RND2P52198 227 aa12.78□□□□□ -0.36
CLN6-208ENST00000567060 YPEL3P61236 119 aaPredicted RBP12.78□□□□□ -0.36
CLN6-208ENST00000567060 HBG1P69891 147 aa12.78□□□□□ -0.36
CLN6-208ENST00000567060 HBG2P69892 147 aa12.78□□□□□ -0.36
CLN6-208ENST00000567060 C11orf87Q6NUJ2 197 aa12.78□□□□□ -0.36
CLN6-208ENST00000567060 ZNF600Q6ZNG1 722 aa12.78□□□□□ -0.36
CLN6-208ENST00000567060 Q6ZNX1 250 aa12.78□□□□□ -0.36
CLN6-208ENST00000567060 OR9G4Q8NGQ1 327 aa12.78□□□□□ -0.36
CLN6-208ENST00000567060 AURKAIP1Q9NWT8 199 aaPredicted RBP12.78□□□□□ -0.36
CLN6-208ENST00000567060 ZMAT5Q9UDW3 170 aaKnown RBP12.78□□□□□ -0.36
CLN6-208ENST00000567060 OR2C1O95371 312 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 METTL15P1P0C7V9 234 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 IGLC1P0CG04 106 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 LYL1P12980 280 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 SULT1A1P50225 295 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 BAXQ07812 192 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 GAMTQ14353 236 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 C9orf66Q5T8R8 295 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 TMEM252Q8N6L7 170 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 THAP6Q8TBB0 222 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 MARC2Q969Z3 335 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 UFC1Q9Y3C8 167 aa12.77□□□□□ -0.37
CLN6-208ENST00000567060 K7EMT4 169 aa12.76□□□□□ -0.37
CLN6-208ENST00000567060 CFDP00746 253 aaPredicted RBP12.76□□□□□ -0.37
CLN6-208ENST00000567060 OR10J1P30954 320 aa12.76□□□□□ -0.37
CLN6-208ENST00000567060 S100A11P31949 105 aa12.76□□□□□ -0.37
CLN6-208ENST00000567060 SYNJ2BPP57105 145 aa12.76□□□□□ -0.37
CLN6-208ENST00000567060 MLANAQ16655 118 aa12.76□□□□□ -0.37
CLN6-208ENST00000567060 ATP6V1FQ16864 119 aa12.76□□□□□ -0.37
CLN6-208ENST00000567060 LRRC37A5PQ49AS3 106 aa12.76□□□□□ -0.37
CLN6-208ENST00000567060 TMEM144Q7Z5S9 345 aa12.76□□□□□ -0.37
CLN6-208ENST00000567060 TMEM190Q8WZ59 177 aa12.76□□□□□ -0.37
CLN6-208ENST00000567060 NPIPB3Q92617 1050 aa12.76□□□□□ -0.37
CLN6-208ENST00000567060 CHRDL1Q9BU40 450 aa12.76□□□□□ -0.37
CLN6-208ENST00000567060 IGHV3-48P01763 117 aa12.75□□□□□ -0.37
CLN6-208ENST00000567060 OR8G2PQ6IF36 304 aa12.75□□□□□ -0.37
CLN6-208ENST00000567060 ACOT7LQ6ZUV0 252 aa12.75□□□□□ -0.37
CLN6-208ENST00000567060 THAP8Q8NA92 274 aa12.75□□□□□ -0.37
CLN6-208ENST00000567060 ACY3Q96HD9 319 aa12.75□□□□□ -0.37
CLN6-208ENST00000567060 TRGV9Q99603 122 aa12.75□□□□□ -0.37
CLN6-208ENST00000567060 GINS3Q9BRX5 216 aa12.75□□□□□ -0.37
CLN6-208ENST00000567060 RNF126Q9BV68 326 aa12.75□□□□□ -0.37
CLN6-208ENST00000567060 NPVFQ9HCQ7 196 aa12.75□□□□□ -0.37
CLN6-208ENST00000567060 DAZ1Q9NQZ3 744 aaKnown RBP12.75□□□□□ -0.37
CLN6-208ENST00000567060 MRPL36Q9P0J6 103 aaKnown RBP12.75□□□□□ -0.37
CLN6-208ENST00000567060 FAM24AA6NFZ4 105 aa12.74□□□□□ -0.37
CLN6-208ENST00000567060 ZFP92A6NM28 416 aa12.74□□□□□ -0.37
CLN6-208ENST00000567060 SEC14L6B5MCN3 397 aa12.74□□□□□ -0.37
CLN6-208ENST00000567060 H0YIZ8 118 aa12.74□□□□□ -0.37
CLN6-208ENST00000567060 IGKV1-17P01599 117 aa12.74□□□□□ -0.37
CLN6-208ENST00000567060 Q8WTZ3 238 aa12.74□□□□□ -0.37
CLN6-208ENST00000567060 OR5AC2Q9NZP5 309 aa12.74□□□□□ -0.37
CLN6-208ENST00000567060 TOMM40O96008 361 aa12.73□□□□□ -0.37
CLN6-208ENST00000567060 BMI1P35226 326 aa12.73□□□□□ -0.37
CLN6-208ENST00000567060 AKR1C1Q04828 323 aa12.73□□□□□ -0.37
CLN6-208ENST00000567060 SLC38A11Q08AI6 406 aa12.73□□□□□ -0.37
CLN6-208ENST00000567060 OR2K2Q8NGT1 345 aa12.73□□□□□ -0.37
CLN6-208ENST00000567060 MRPL27Q9P0M9 148 aaKnown RBP12.73□□□□□ -0.37
CLN6-208ENST00000567060 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
CLN6-208ENST00000567060 IGSF23A1L1A6 192 aa12.72□□□□□ -0.37
CLN6-208ENST00000567060 ZNF320A2RRD8 509 aa12.72□□□□□ -0.37
CLN6-208ENST00000567060 SELENOTP62341 195 aa12.72□□□□□ -0.37
CLN6-208ENST00000567060 VWC2Q2TAL6 325 aa12.72□□□□□ -0.37
CLN6-208ENST00000567060 CHAC2Q8WUX2 184 aa12.72□□□□□ -0.37
CLN6-208ENST00000567060 TMEM147Q9BVK8 224 aa12.72□□□□□ -0.37
CLN6-208ENST00000567060 ZC4H2Q9NQZ6 224 aa12.72□□□□□ -0.37
CLN6-208ENST00000567060 TECRQ9NZ01 308 aaKnown RBP12.72□□□□□ -0.37
CLN6-208ENST00000567060 TMEM213A2RRL7 107 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 C2orf70A6NJV1 201 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 CST7O76096 145 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 CD5P06127 495 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 RD3LP0DJH9 198 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 C8orf88P0DMB2 117 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 S100A7P31151 101 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 NUP62P37198 522 aaPredicted RBP12.71□□□□□ -0.37
CLN6-208ENST00000567060 EWSR1Q01844 656 aaKnown RBP eCLIP12.71□□□□□ -0.377e-6■■□□□ 12.2
CLN6-208ENST00000567060 TIGITQ495A1 244 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 TEPPQ6URK8 271 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 IL34Q6ZMJ4 242 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 HAPLN4Q86UW8 402 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 LILRB2Q8N423 598 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 OR51G1Q8NGK1 321 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 OR2T35Q8NGX2 323 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 WDR89Q96FK6 387 aaPredicted RBP12.71□□□□□ -0.37
CLN6-208ENST00000567060 UQCC1Q9NVA1 299 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 PFDN2Q9UHV9 154 aa12.71□□□□□ -0.37
CLN6-208ENST00000567060 PUS1Q9Y606 427 aaKnown RBP eCLIP12.71□□□□□ -0.37
CLN6-208ENST00000567060 IGKV1D-37A0A075B6S9 117 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 TRAV14DV4A0A0A6YYC5 116 aa12.7□□□□□ -0.38
CLN6-208ENST00000567060 SMCO3A2RU48 225 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms