RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 GUCD1Q96NT3 240 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 RCHY1Q96PM5 261 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 DKK1O94907 266 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 ZNF138P52744 262 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 UBE2V1Q13404 147 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 TRIP6Q15654 476 aaKnown RBP8.66□□□□□ -1.02
USB1-212ENST00000566082 TPTE2P1Q5T6R2 138 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 AMMECR1LQ6DCA0 310 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 TMEM136Q6ZRR5 245 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 DEFB124Q8NES8 71 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 FDCSPQ8NFU4 85 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 OSR1Q8TAX0 266 aaPredicted RBP8.66□□□□□ -1.02
USB1-212ENST00000566082 GP6Q9HCN6 339 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 UFC1Q9Y3C8 167 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 WDFY4Q6ZS81 3184 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 TRBV20OR9-2A0A075B6H5 130 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 PDLIM4P50479 330 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 PRB3Q04118 309 aaPredicted RBP8.66□□□□□ -1.02
USB1-212ENST00000566082 ZCCHC24Q8N2G6 241 aaKnown RBP8.66□□□□□ -1.02
USB1-212ENST00000566082 NUP35Q8NFH5 326 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 CACNG8Q8WXS5 425 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 SCNM1Q9BWG6 230 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 HILPDAQ9Y5L2 63 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 VPS13AQ96RL7 3174 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 SH2D7A6NKC9 451 aaPredicted RBP8.66□□□□□ -1.02
USB1-212ENST00000566082 TEX43Q6ZNM6 134 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 MED12LQ86YW9 2145 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 C18orf15Q96N68 181 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 NAA38Q9BRA0 125 aaKnown RBP8.66□□□□□ -1.02
USB1-212ENST00000566082 SLC25A33Q9BSK2 321 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 PRDM6Q9NQX0 595 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 EPDR1Q9UM22 224 aa8.66□□□□□ -1.02
USB1-212ENST00000566082 TMEM265A0A087WTH1 108 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 LY6G6EA0A0G2JKS1 128 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 A0A1B0GWJ7 208 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 TMEM189A5PLL7 270 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 FCGR2BP31994 310 aaPredicted RBP8.65□□□□□ -1.02
USB1-212ENST00000566082 ATP5IP56385 69 aaPredicted RBP8.65□□□□□ -1.02
USB1-212ENST00000566082 TWIST1Q15672 202 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 SAPCD1Q5SSQ6 148 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 RBPMS2Q6ZRY4 209 aaKnown RBP8.65□□□□□ -1.02
USB1-212ENST00000566082 CENPVQ7Z7K6 275 aaPredicted RBP8.65□□□□□ -1.02
USB1-212ENST00000566082 LOXL4Q96JB6 756 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 U3KQA8 63 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 V9GYV3 84 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 A0A1B0GUT8 65 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 FAM90A9PA6NNJ1 464 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 SRRM5B3KS81 715 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 K7EN84 100 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 GLRXP35754 106 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 MAJINQ3KP22 176 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 DEFB123Q8N688 67 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.65□□□□□ -1.02
USB1-212ENST00000566082 C18orf32Q8TCD1 76 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 LY96Q9Y6Y9 160 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 S4R3C0 116 aa8.65□□□□□ -1.02
USB1-212ENST00000566082 CREBBPQ92793 2442 aa8.65□□□□□ -1.03
USB1-212ENST00000566082 FRMD6-AS1P0C7T7 363 aa8.65□□□□□ -1.03
USB1-212ENST00000566082 MC5RP33032 325 aa8.65□□□□□ -1.03
USB1-212ENST00000566082 ERVK11-1P61568 191 aa8.65□□□□□ -1.03
USB1-212ENST00000566082 ZNF295-AS1Q8N0V1 137 aa8.65□□□□□ -1.03
USB1-212ENST00000566082 TMEM116Q8NCL8 245 aa8.65□□□□□ -1.03
USB1-212ENST00000566082 THYN1Q9P016 225 aa8.65□□□□□ -1.03
USB1-212ENST00000566082 GPR183P32249 361 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 SLAQ13239 276 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 MRPL52Q86TS9 123 aaKnown RBP8.64□□□□□ -1.03
USB1-212ENST00000566082 COL25A1Q9BXS0 654 aaPredicted RBP8.64□□□□□ -1.03
USB1-212ENST00000566082 Q9H3A6 140 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 ZNRD1Q9P1U0 126 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 FOXA2Q9Y261 457 aaPredicted RBP8.64□□□□□ -1.03
USB1-212ENST00000566082 IGKV1D-17A0A075B6S4 117 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 SPAARA0A1B0GVQ0 90 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 AHRRA9YTQ3 701 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 IGKV1-16P04430 117 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 FABP2P12104 132 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 S100A4P26447 101 aaKnown RBP8.64□□□□□ -1.03
USB1-212ENST00000566082 PRR7Q8TB68 274 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 CDX2Q99626 313 aaPredicted RBP8.64□□□□□ -1.03
USB1-212ENST00000566082 FNDC4Q9H6D8 234 aaPredicted RBP8.64□□□□□ -1.03
USB1-212ENST00000566082 COX11Q9Y6N1 276 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 A0A087X0K7 114 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 TRGV8A0A0C4DH27 118 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 IGHV3-35A0A0C4DH35 117 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 GGTLC3B5MD39 225 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 J3KRW8 73 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 CRYABP02511 175 aaKnown RBP8.64□□□□□ -1.03
USB1-212ENST00000566082 CD24P25063 80 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 VDAC2P45880 294 aaPredicted RBP8.64□□□□□ -1.03
USB1-212ENST00000566082 PNKDQ8N490 385 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 ORAOV1Q8WV07 137 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 EML6Q6ZMW3 1958 aa8.64□□□□□ -1.03
USB1-212ENST00000566082 TMEM131Q92545 1883 aa8.63□□□□□ -1.03
USB1-212ENST00000566082 H3BUT2 72 aa8.63□□□□□ -1.03
USB1-212ENST00000566082 IGHV1-18A0A0C4DH31 117 aa8.63□□□□□ -1.03
USB1-212ENST00000566082 A1L4Q6 167 aa8.63□□□□□ -1.03
USB1-212ENST00000566082 KLK10O43240 276 aa8.63□□□□□ -1.03
USB1-212ENST00000566082 TRAV8-1A0A0A6YYK1 113 aa8.63□□□□□ -1.03
USB1-212ENST00000566082 TCRBV4S1A1TA0A5B7 111 aa8.63□□□□□ -1.03
USB1-212ENST00000566082 SS18L1O75177 396 aaPredicted RBP8.63□□□□□ -1.03
USB1-212ENST00000566082 RBPJQ06330 500 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms