RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 Q8NAQ8 132 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 OR10W1Q8NGF6 305 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 LHFPL5Q8TAF8 219 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 SCARB1Q8WTV0 552 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 GLYATL2Q8WU03 294 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 MITD1Q8WV92 249 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 RBPMSQ93062 196 aaKnown RBP9.29□□□□□ -0.92
RNF40-208ENST00000565995 RRNAD1Q96FB5 475 aaKnown RBP9.29□□□□□ -0.92
RNF40-208ENST00000565995 OR10C1Q96KK4 312 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 RNF2Q99496 336 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 QTRT1Q9BXR0 403 aaKnown RBP9.29□□□□□ -0.92
RNF40-208ENST00000565995 COMMD5Q9GZQ3 224 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 MED28Q9H204 178 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 PLEKHA2Q9HB19 425 aa9.29□□□□□ -0.92
RNF40-208ENST00000565995 FAM212BQ9NTI7 297 aaPredicted RBP9.29□□□□□ -0.92
RNF40-208ENST00000565995 IGHV7-4-1A0A0J9YVY3 117 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 MARCH11A6NNE9 402 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 C15orf61A6NNL5 157 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 FAM25EA8MYX2 175 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 GOSR2O14653 212 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 KRASP01116 189 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 IFNA21P01568 189 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 CTSGP08311 255 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 HOXB5P09067 269 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 NQO2P16083 231 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 WT1-ASQ06250 92 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 IL22RA2Q969J5 263 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 C21orf62Q9NYP8 219 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 NACAE9PAV3 2078 aa9.28□□□□□ -0.92
RNF40-208ENST00000565995 A0A0B4J2A0 478 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 TEX50A0A1B0GTY4 177 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 CCSO14618 274 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 CDS2O95674 445 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 CD5P06127 495 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 TRAPPC2P0DI81 140 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 TRAPPC2BP0DI82 140 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 SLC25A24Q6NUK1 477 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 H2BFWTQ7Z2G1 175 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 LYZL2Q7Z4W2 148 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 SELENOHQ8IZQ5 122 aaKnown RBP9.27□□□□□ -0.93
RNF40-208ENST00000565995 TMEM116Q8NCL8 245 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 TMEM56Q96MV1 263 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 C20orf24Q9BUV8 137 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 RHPN1-AS1Q9BWJ2 59 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 NDUFA4L2Q9NRX3 87 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 MGAT4CQ9UBM8 478 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 SHPKQ9UHJ6 478 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 F11RQ9Y624 299 aaKnown RBP9.27□□□□□ -0.93
RNF40-208ENST00000565995 TMEM56-RWDD3S4R434 201 aa9.27□□□□□ -0.93
RNF40-208ENST00000565995 DUXBA0A1W2PPF3 345 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 C5orf51A6NDU8 294 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 K7EIM0 57 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 RTL8CO15255 209 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 DEFB4AO15263 64 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 ZNF207O43670 478 aaKnown RBP9.26□□□□□ -0.93
RNF40-208ENST00000565995 ADAP1O75689 374 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 DFFBO76075 338 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 IGKV1-39P01597 117 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 IGKV1D-39P04432 117 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 OR13C7P0DN81 318 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 RRAS2P62070 204 aaPredicted RBP9.26□□□□□ -0.93
RNF40-208ENST00000565995 LRTM2Q8N967 370 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 PDCD10Q9BUL8 212 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 RNF126Q9BV68 326 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 TMEM140Q9NV12 185 aa9.26□□□□□ -0.93
RNF40-208ENST00000565995 IGHV4-4A0A075B6R2 117 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 IGHV3OR16-8A0A075B7F1 116 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 TRAV2A0A0B4J234 112 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 TRAV10A0A0B4J240 114 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 A0A1B0GVG6 124 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 PRSS29PA6NIE9 313 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 CA1P00915 261 aaPredicted RBP9.25□□□□□ -0.93
RNF40-208ENST00000565995 IGKV1-5P01602 117 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 GIG44P09565 113 aaPredicted RBP9.25□□□□□ -0.93
RNF40-208ENST00000565995 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
RNF40-208ENST00000565995 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 RELQ04864 619 aaPredicted RBP9.25□□□□□ -0.93
RNF40-208ENST00000565995 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
RNF40-208ENST00000565995 TMEM41BQ5BJD5 291 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 GGNBP1Q5YKI7 109 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 PVRIGQ6DKI7 326 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 GSG1LQ6UXU4 331 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 OR1L8Q8NGR8 309 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 SEC22AQ96IW7 307 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 TXN2Q99757 166 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 KRTAP4-5Q9BYR2 181 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 TMED3Q9Y3Q3 217 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 HSPG2P98160 4391 aa9.25□□□□□ -0.93
RNF40-208ENST00000565995 TRAV14DV4A0A0A6YYC5 116 aa9.24□□□□□ -0.93
RNF40-208ENST00000565995 ZNF705EA8MWA4 302 aaPredicted RBP9.24□□□□□ -0.93
RNF40-208ENST00000565995 SNAPC5O75971 98 aa9.24□□□□□ -0.93
RNF40-208ENST00000565995 MIFP14174 115 aa9.24□□□□□ -0.93
RNF40-208ENST00000565995 HLA-DMBP28068 263 aa9.24□□□□□ -0.93
RNF40-208ENST00000565995 PAFAH1B2P68402 229 aa9.24□□□□□ -0.93
RNF40-208ENST00000565995 FCN2Q15485 313 aa9.24□□□□□ -0.93
RNF40-208ENST00000565995 IZUMO4Q1ZYL8 232 aa9.24□□□□□ -0.93
RNF40-208ENST00000565995 IAH1Q2TAA2 248 aaPredicted RBP9.24□□□□□ -0.93
RNF40-208ENST00000565995 FAM219AQ8IW50 185 aa9.24□□□□□ -0.93
RNF40-208ENST00000565995 POM121L12Q8N7R1 296 aa9.24□□□□□ -0.93
RNF40-208ENST00000565995 OR4A16Q8NH70 328 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms