RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 CENPVQ7Z7K6 275 aaPredicted RBP10.07□□□□□ -0.8
SPG7-209ENST00000564047 ZNF329Q86UD4 541 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 NECAP1Q8NC96 275 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 OR5C1Q8NGR4 320 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 PARD6GQ9BYG4 376 aaPredicted RBP10.07□□□□□ -0.8
SPG7-209ENST00000564047 FBXL7Q9UJT9 491 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 PLXNB1O43157 2135 aa10.07□□□□□ -0.8
SPG7-209ENST00000564047 FAM223BA6NKX1 122 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 FNDC10F2Z333 226 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 F8W036 122 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 I3L2K1 104 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 K7EIM0 57 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 NDUFB8O95169 186 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 MT-CO2P00403 227 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 ELANEP08246 267 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 PF4V1P10720 104 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 ADCYAP1P18509 176 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 ATP6V0CP27449 155 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 PSMB8P28062 276 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 RHOGP84095 191 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 FOXE3Q13461 319 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 FAM223AQ8IWN6 122 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 LILRB2Q8N423 598 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 HSD17B11Q8NBQ5 300 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 MS4A10Q96PG2 267 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 SMDT1Q9H4I9 107 aa10.06□□□□□ -0.8
SPG7-209ENST00000564047 FNDC4Q9H6D8 234 aaPredicted RBP10.06□□□□□ -0.8
SPG7-209ENST00000564047 TRRAPQ9Y4A5 3859 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 A0A1B0GUS0 222 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 CLPSL1A2RUU4 121 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 DNASE2O00115 360 aaPredicted RBP10.05□□□□□ -0.8
SPG7-209ENST00000564047 SNAPINO95295 136 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 TRGV3P03979 118 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 RAB9AP51151 201 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 TPPP2P59282 170 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 SRSF3P84103 164 aaKnown RBP10.05□□□□□ -0.8
SPG7-209ENST00000564047 CLINT1Q14677 625 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 PEA15Q15121 130 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 MLANAQ16655 118 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 VWC2Q2TAL6 325 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 ATRAIDQ6UW56 229 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 SLC16A13Q7RTY0 426 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 KLHDC1Q8N7A1 406 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 RNF152Q8N8N0 203 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 OR2G3Q8NGZ4 309 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 VN1R17PQ8TDU5 208 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 WIPF2Q8TF74 440 aaPredicted RBP10.05□□□□□ -0.8
SPG7-209ENST00000564047 USMG5Q96IX5 58 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 PBDC1Q9BVG4 233 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 TMEM147Q9BVK8 224 aa10.05□□□□□ -0.8
SPG7-209ENST00000564047 A0A0G2JLM5 398 aa10.04□□□□□ -0.8
SPG7-209ENST00000564047 IFNA5P01569 189 aa10.04□□□□□ -0.8
SPG7-209ENST00000564047 ATP5G2Q06055 141 aa10.04□□□□□ -0.8
SPG7-209ENST00000564047 C15orf32Q32M92 178 aa10.04□□□□□ -0.8
SPG7-209ENST00000564047 C10orf99Q6UWK7 81 aa10.04□□□□□ -0.8
SPG7-209ENST00000564047 TMEM182Q6ZP80 229 aaPredicted RBP10.04□□□□□ -0.8
SPG7-209ENST00000564047 OR5AU1Q8NGC0 362 aa10.04□□□□□ -0.8
SPG7-209ENST00000564047 SLC35E1Q96K37 410 aa10.04□□□□□ -0.8
SPG7-209ENST00000564047 PSMG3Q9BT73 122 aaPredicted RBP10.04□□□□□ -0.8
SPG7-209ENST00000564047 SH3BGRL3Q9H299 93 aa10.04□□□□□ -0.8
SPG7-209ENST00000564047 KLK15Q9H2R5 256 aa10.04□□□□□ -0.8
SPG7-209ENST00000564047 RNF114Q9Y508 228 aa10.04□□□□□ -0.8
SPG7-209ENST00000564047 MDKP21741 143 aaPredicted RBP10.03□□□□□ -0.8
SPG7-209ENST00000564047 FCGR2BP31994 310 aaPredicted RBP10.03□□□□□ -0.8
SPG7-209ENST00000564047 PROK1P58294 105 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 AKR1C1Q04828 323 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 ZNF616Q08AN1 781 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 GAMTQ14353 236 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.03□□□□□ -0.8
SPG7-209ENST00000564047 TMEM116Q8NCL8 245 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 OR4X2Q8NGF9 303 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 OR4X1Q8NH49 305 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 MYOZ3Q8TDC0 251 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 ATP6V0BQ99437 205 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 TXN2Q99757 166 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 SCRT1Q9BWW7 348 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 TMEM231Q9H6L2 316 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 NPVFQ9HCQ7 196 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 C21orf62Q9NYP8 219 aa10.03□□□□□ -0.8
SPG7-209ENST00000564047 TRBV7-1A0A0A6YYK4 115 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 IGHV3-21A0A0B4J1V1 117 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 LOC105371267A0A1B0GV96 52 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 SMCO3A2RU48 225 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 IGHV3-48P01763 117 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 HBE1P02100 147 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 SFTA3P0C7M3 94 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 NPBWR1P48145 328 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 MFAP4P55083 255 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 FOXL1Q12952 345 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 KIAA0141Q14154 515 aaPredicted RBP10.02□□□□□ -0.81
SPG7-209ENST00000564047 GUCA2BQ16661 112 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 GUK1Q16774 197 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 AKR1C8PQ5T2L2 129 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 ACSM6Q6P461 480 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 TMEM144Q7Z5S9 345 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.02□□□□□ -0.81
SPG7-209ENST00000564047 FAM213BQ8TBF2 198 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 EEF1AKMT3Q96AZ1 226 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 ACY3Q96HD9 319 aa10.02□□□□□ -0.81
SPG7-209ENST00000564047 MRPL36Q9P0J6 103 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms