RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 PRR20DP86480 221 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 PRR20BP86481 221 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 PRR20AP86496 221 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 CFHR3Q02985 330 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 C15orf32Q32M92 178 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 FAM209BQ5JX69 171 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 PXDC1Q5TGL8 231 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 Q6ZS46 218 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 STPG3Q8N7X2 389 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 BPIFCQ8NFQ6 507 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 OR10G4Q8NGN3 311 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 OR10G9Q8NGN4 311 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 OR10G7Q8NGN6 311 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 EEF1AKMT3Q96AZ1 226 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 USMG5Q96IX5 58 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 PFDN5Q99471 154 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 RNF2Q99496 336 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 ZNF702PQ9H963 129 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 RPRMQ9NS64 109 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 SLC39A9Q9NUM3 307 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 C21orf62Q9NYP8 219 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 PFDN2Q9UHV9 154 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 RFNGQ9Y644 331 aa6.73□□□□□ -1.33
TRAF3-209ENST00000560463 IGHV3-21A0A0B4J1V1 117 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 A0A0G2JLM5 398 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 CTXND1A0A1B0GTU2 59 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 GNG7O60262 68 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 IGHV3-48P01763 117 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 IGHG4P01861 327 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 TRGV3P03979 118 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 H2AFB1P0C5Y9 115 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 LINC00869P0C866 280 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 IGLC1P0CG04 106 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 ELLP55199 621 aaPredicted RBP6.72□□□□□ -1.33
TRAF3-209ENST00000560463 YPEL3P61236 119 aaPredicted RBP6.72□□□□□ -1.33
TRAF3-209ENST00000560463 RHOBP62745 196 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 ATP5G2Q06055 141 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 MIC13Q5XKP0 118 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 COMMD1Q8N668 190 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 OR1L4Q8NGR5 311 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 FAM213BQ8TBF2 198 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 GATAD1Q8WUU5 269 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 MBD3L1Q8WWY6 194 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 NOL4LQ96MY1 436 aaPredicted RBP6.72□□□□□ -1.33
TRAF3-209ENST00000560463 ACTR3CQ9C0K3 210 aaPredicted RBP6.72□□□□□ -1.33
TRAF3-209ENST00000560463 VSIRQ9H7M9 311 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 MRPL36Q9P0J6 103 aaKnown RBP6.72□□□□□ -1.33
TRAF3-209ENST00000560463 LINC00527Q9UJ94 153 aa6.72□□□□□ -1.33
TRAF3-209ENST00000560463 ELOA3CA0A087WX78 387 aaPredicted RBP6.71□□□□□ -1.34
TRAF3-209ENST00000560463 TRAV1-1A0A0B4J248 108 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 A0A1W2PPV4 95 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 FAM181BA6NEQ2 426 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 MFSD2BA6NFX1 497 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 SEC14L6B5MCN3 397 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 YIF1AO95070 293 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 TOMM40O96008 361 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 CRYBA1P05813 215 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 ELANEP08246 267 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 CDC34P49427 236 aaPredicted RBP6.71□□□□□ -1.34
TRAF3-209ENST00000560463 RAB9AP51151 201 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 PLP1P60201 277 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 ZNF616Q08AN1 781 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 Q56UQ5 140 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 TEX38Q6PEX7 206 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 SPSB3Q6PJ21 355 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 IL34Q6ZMJ4 242 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 S100A7AQ86SG5 101 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 RPP25LQ8N5L8 163 aaKnown RBP6.71□□□□□ -1.34
TRAF3-209ENST00000560463 ZNF502Q8TBZ5 544 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 PCNPQ8WW12 178 aaKnown RBP6.71□□□□□ -1.34
TRAF3-209ENST00000560463 MS4A10Q96PG2 267 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 DUX5Q96PT3 197 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 MRPL32Q9BYC8 188 aaKnown RBP6.71□□□□□ -1.34
TRAF3-209ENST00000560463 ESM1Q9NQ30 184 aa6.71□□□□□ -1.34
TRAF3-209ENST00000560463 FN1P02751 2386 aaKnown RBP6.71□□□□□ -1.34
TRAF3-209ENST00000560463 RAB19A4D1S5 217 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 PSMB11A5LHX3 300 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 INAFM1C9JVW0 142 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 F8W735 103 aaPredicted RBP6.7□□□□□ -1.34
TRAF3-209ENST00000560463 CRLF1O75462 422 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 IGKV1-17P01599 117 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 CTSGP08311 255 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 RD3LP0DJH9 198 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 PF4V1P10720 104 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 PSMB8P28062 276 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 FHITP49789 147 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 TPPP2P59282 170 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 ZNF90Q03938 601 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 FOXE3Q13461 319 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 PMS2P11Q13670 270 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 TIGITQ495A1 244 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 Q6ZSV7 163 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 EIF4E3Q8N5X7 224 aaKnown RBP6.7□□□□□ -1.34
TRAF3-209ENST00000560463 OR51G1Q8NGK1 321 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 Q8WTZ3 238 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 RAB24Q969Q5 203 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 RCC1LQ96I51 464 aaKnown RBP6.7□□□□□ -1.34
TRAF3-209ENST00000560463 HRH4Q9H3N8 390 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 C16orf95Q9H693 158 aa6.7□□□□□ -1.34
TRAF3-209ENST00000560463 DNAJC4Q9NNZ3 241 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms