RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 FOXH1O75593 365 aa13.26□□□□□ -0.29
PBX1-215ENST00000559240 CBLN1P23435 193 aa13.26□□□□□ -0.29
PBX1-215ENST00000559240 PNKDQ8N490 385 aa13.26□□□□□ -0.29
PBX1-215ENST00000559240 DEFB125Q8N687 156 aa13.26□□□□□ -0.29
PBX1-215ENST00000559240 IGKV1D-13A0A0B4J2D9 117 aa13.25□□□□□ -0.29
PBX1-215ENST00000559240 CST7O76096 145 aa13.25□□□□□ -0.29
PBX1-215ENST00000559240 IGKV1-13P0DP09 117 aa13.25□□□□□ -0.29
PBX1-215ENST00000559240 KCNIP4Q6PIL6 250 aa13.25□□□□□ -0.29
PBX1-215ENST00000559240 CCDC71LQ8N9Z2 235 aa13.25□□□□□ -0.29
PBX1-215ENST00000559240 CRYM-AS1A6NIL9 109 aa13.25□□□□□ -0.29
PBX1-215ENST00000559240 ENSAO43768 121 aaKnown RBP13.25□□□□□ -0.29
PBX1-215ENST00000559240 EIF4EBP1Q13541 118 aaPredicted RBP13.25□□□□□ -0.29
PBX1-215ENST00000559240 SPATA31B1PQ5VZV4 182 aa13.25□□□□□ -0.29
PBX1-215ENST00000559240 CYP2G1PQ6ZSU1 146 aa13.25□□□□□ -0.29
PBX1-215ENST00000559240 ZNF645Q8N7E2 425 aa13.25□□□□□ -0.29
PBX1-215ENST00000559240 BLNKQ8WV28 456 aa13.25□□□□□ -0.29
PBX1-215ENST00000559240 C19orf24Q9BVV8 132 aa13.25□□□□□ -0.29
PBX1-215ENST00000559240 ZNF253O75346 499 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 IGLV2-14P01704 120 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 C3orf79P0CE67 100 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 BVES-AS1Q5T3Y7 98 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 RTN4IP1Q8WWV3 396 aaPredicted RBP13.24□□□□□ -0.29
PBX1-215ENST00000559240 TSSC4Q9Y5U2 329 aaPredicted RBP13.24□□□□□ -0.29
PBX1-215ENST00000559240 LRBAP50851 2863 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 IGHV4-30-2A0A087WSY4 118 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 M0R1X1 148 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 GPX1P07203 203 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 IGHV1-8P0DP01 117 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 SLC25A48Q6ZT89 311 aaKnown RBP13.24□□□□□ -0.29
PBX1-215ENST00000559240 LYZL2Q7Z4W2 148 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 LGI3Q8N145 548 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 OR5B3Q8NH48 314 aa13.24□□□□□ -0.29
PBX1-215ENST00000559240 DCHS2Q6V1P9 2916 aa13.23□□□□□ -0.29
PBX1-215ENST00000559240 IGSF23A1L1A6 192 aa13.23□□□□□ -0.29
PBX1-215ENST00000559240 LTC4SQ16873 150 aa13.23□□□□□ -0.29
PBX1-215ENST00000559240 OR5C1Q8NGR4 320 aa13.23□□□□□ -0.29
PBX1-215ENST00000559240 RFESDQ8TAC1 157 aa13.23□□□□□ -0.29
PBX1-215ENST00000559240 GNG12Q9UBI6 72 aa13.23□□□□□ -0.29
PBX1-215ENST00000559240 HELZ2Q9BYK8 2649 aaKnown RBP13.23□□□□□ -0.29
PBX1-215ENST00000559240 CCL3L1P16619 93 aa13.23□□□□□ -0.29
PBX1-215ENST00000559240 PDE6DO43924 150 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 IGLL1P15814 213 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 CD1BP29016 333 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 ZNF137PP52743 207 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 LOXL1Q08397 574 aaPredicted RBP13.22□□□□□ -0.29
PBX1-215ENST00000559240 PRR31Q5SQ13 230 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 ZNF818PQ6ZRF7 136 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 GTF2H5Q6ZYL4 71 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 IFI27L2Q9H2X8 130 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 IGHV4-61A0A0C4DH41 118 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 FAM231BA6NCW3 169 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 ZFP36P26651 326 aaKnown RBP13.22□□□□□ -0.29
PBX1-215ENST00000559240 SRP14P37108 136 aaKnown RBP13.22□□□□□ -0.29
PBX1-215ENST00000559240 FXYD4P59646 89 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 HSD52Q0P140 79 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 NEGR1Q7Z3B1 354 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 VSIRQ9H7M9 311 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 NAA60Q9H7X0 242 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 FBN2P35556 2912 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 PIGBOS1A0A0B4J2F0 54 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 CENPVQ7Z7K6 275 aaPredicted RBP13.22□□□□□ -0.29
PBX1-215ENST00000559240 HAPLN4Q86UW8 402 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 KRTAP1-3Q8IUG1 177 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 FAM19A2Q8N3H0 131 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 LRTM2Q8N967 370 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 TMEM133Q9H2Q1 129 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 CCL28Q9NRJ3 127 aa13.22□□□□□ -0.29
PBX1-215ENST00000559240 PEF1Q9UBV8 284 aaKnown RBP13.22□□□□□ -0.29
PBX1-215ENST00000559240 SPTAN1Q13813 2472 aaKnown RBP13.21□□□□□ -0.29
PBX1-215ENST00000559240 DUXBA0A1W2PPF3 345 aa13.21□□□□□ -0.29
PBX1-215ENST00000559240 USF1P22415 310 aaPredicted RBP13.21□□□□□ -0.29
PBX1-215ENST00000559240 PIGPP57054 158 aa13.21□□□□□ -0.29
PBX1-215ENST00000559240 ABCA11PQ4W5N1 156 aa13.21□□□□□ -0.29
PBX1-215ENST00000559240 SMIM20Q8N5G0 67 aa13.21□□□□□ -0.29
PBX1-215ENST00000559240 UBALD1Q8TB05 177 aa13.21□□□□□ -0.29
PBX1-215ENST00000559240 UTP20O75691 2785 aaKnown RBP13.21□□□□□ -0.29
PBX1-215ENST00000559240 TEX48A0A1B0GUV7 120 aa13.21□□□□□ -0.3
PBX1-215ENST00000559240 MPPED1O15442 326 aa13.21□□□□□ -0.3
PBX1-215ENST00000559240 KBTBD11O94819 623 aa13.21□□□□□ -0.3
PBX1-215ENST00000559240 CT45A1Q5HYN5 189 aa13.21□□□□□ -0.3
PBX1-215ENST00000559240 Q8N7P7 452 aa13.21□□□□□ -0.3
PBX1-215ENST00000559240 CT45A3Q8NHU0 189 aa13.21□□□□□ -0.3
PBX1-215ENST00000559240 FOXC2Q99958 501 aa13.21□□□□□ -0.3
PBX1-215ENST00000559240 PSG8Q9UQ74 426 aa13.21□□□□□ -0.3
PBX1-215ENST00000559240 TSPAN13O95857 204 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 PRTN3P24158 256 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 ZNF134P52741 427 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 OR2C3Q8N628 320 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 DRAM1Q8N682 238 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 OR9G1Q8NH87 305 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 IGHV3-43A0A0B4J1X8 118 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 GAGE12HA6NDE8 117 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 PHF1O43189 567 aaPredicted RBP13.2□□□□□ -0.3
PBX1-215ENST00000559240 PGLYRP1O75594 196 aaPredicted RBP13.2□□□□□ -0.3
PBX1-215ENST00000559240 IGHV3-43DP0DP04 118 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 DYNLT3P51808 116 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 LCN2P80188 198 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 SIRPDQ9H106 197 aa13.2□□□□□ -0.3
PBX1-215ENST00000559240 H0Y980 276 aa13.19□□□□□ -0.3
PBX1-215ENST00000559240 HMGB3O15347 200 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms