RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 APOHP02749 345 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-210ENST00000559092 SLC25A6P12236 298 aa13.04□□□□□ -0.32
SMAD3-210ENST00000559092 YPEL3P61236 119 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-210ENST00000559092 ZFAND6Q6FIF0 208 aa13.04□□□□□ -0.32
SMAD3-210ENST00000559092 LILRB2Q8N423 598 aa13.04□□□□□ -0.32
SMAD3-210ENST00000559092 STPG3Q8N7X2 389 aa13.04□□□□□ -0.32
SMAD3-210ENST00000559092 DTD1Q8TEA8 209 aa13.04□□□□□ -0.32
SMAD3-210ENST00000559092 TMEM170AQ8WVE7 144 aa13.04□□□□□ -0.32
SMAD3-210ENST00000559092 DFFBO76075 338 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 IFNA10P01566 189 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 IGLC1P0CG04 106 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 OR10J1P30954 320 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 TFPI2P48307 235 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 RND2P52198 227 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 TIGITQ495A1 244 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 WFDC3Q8IUB2 231 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 Q8WTZ3 238 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 NARS2Q96I59 477 aaKnown RBP13.03□□□□□ -0.32
SMAD3-210ENST00000559092 SRRQ9GZT4 340 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 MS4A6AQ9H2W1 248 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 MAP6D1Q9H9H5 199 aa13.03□□□□□ -0.32
SMAD3-210ENST00000559092 DNASE2O00115 360 aaPredicted RBP13.02□□□□□ -0.33
SMAD3-210ENST00000559092 SPRY2O43597 315 aa13.02□□□□□ -0.33
SMAD3-210ENST00000559092 PITX3O75364 302 aa13.02□□□□□ -0.33
SMAD3-210ENST00000559092 VAMP1P23763 118 aa13.02□□□□□ -0.33
SMAD3-210ENST00000559092 UBE2MP61081 183 aaKnown RBP13.02□□□□□ -0.33
SMAD3-210ENST00000559092 GBGT1Q8N5D6 347 aa13.02□□□□□ -0.33
SMAD3-210ENST00000559092 OR1S1Q8NH92 325 aa13.02□□□□□ -0.33
SMAD3-210ENST00000559092 RBKSQ9H477 322 aa13.02□□□□□ -0.33
SMAD3-210ENST00000559092 DYNC2H1Q8NCM8 4307 aaKnown RBP13.02□□□□□ -0.33
SMAD3-210ENST00000559092 STARD9Q9P2P6 4700 aa13.01□□□□□ -0.33
SMAD3-210ENST00000559092 IGKV3-7A0A075B6H7 116 aa13.01□□□□□ -0.33
SMAD3-210ENST00000559092 NAP1L6A6NFF2 107 aa13.01□□□□□ -0.33
SMAD3-210ENST00000559092 NXPH3O95157 252 aa13.01□□□□□ -0.33
SMAD3-210ENST00000559092 GPX4P36969 197 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-210ENST00000559092 RPL11P62913 178 aaKnown RBP13.01□□□□□ -0.33
SMAD3-210ENST00000559092 RBMS2Q15434 407 aaKnown RBP13.01□□□□□ -0.33
SMAD3-210ENST00000559092 APRG1Q8IVJ8 170 aa13.01□□□□□ -0.33
SMAD3-210ENST00000559092 NPIPB3Q92617 1050 aa13.01□□□□□ -0.33
SMAD3-210ENST00000559092 GRAMD2BQ96HH9 432 aa13.01□□□□□ -0.33
SMAD3-210ENST00000559092 TMED3Q9Y3Q3 217 aa13.01□□□□□ -0.33
SMAD3-210ENST00000559092 U3KQE9 123 aa13.01□□□□□ -0.33
SMAD3-210ENST00000559092 IGHV3-66A0A0C4DH42 116 aa13□□□□□ -0.33
SMAD3-210ENST00000559092 FAM90A26D6RGX4 464 aa13□□□□□ -0.33
SMAD3-210ENST00000559092 SFT2D2O95562 160 aa13□□□□□ -0.33
SMAD3-210ENST00000559092 RPL35AP18077 110 aaKnown RBP13□□□□□ -0.33
SMAD3-210ENST00000559092 INPP1P49441 399 aa13□□□□□ -0.33
SMAD3-210ENST00000559092 CENPSQ8N2Z9 138 aa13□□□□□ -0.33
SMAD3-210ENST00000559092 RNF183Q96D59 192 aa13□□□□□ -0.33
SMAD3-210ENST00000559092 CSTL1Q9H114 145 aa13□□□□□ -0.33
SMAD3-210ENST00000559092 NDUFA13Q9P0J0 144 aa13□□□□□ -0.33
SMAD3-210ENST00000559092 LYSTQ99698 3801 aa12.99□□□□□ -0.33
SMAD3-210ENST00000559092 IFNA4P05014 189 aa12.99□□□□□ -0.33
SMAD3-210ENST00000559092 RD3LP0DJH9 198 aa12.99□□□□□ -0.33
SMAD3-210ENST00000559092 P2RY1P47900 373 aa12.99□□□□□ -0.33
SMAD3-210ENST00000559092 EIF2B2P49770 351 aaKnown RBP12.99□□□□□ -0.33
SMAD3-210ENST00000559092 PPP1R1AQ13522 171 aa12.99□□□□□ -0.33
SMAD3-210ENST00000559092 TRIQKQ629K1 86 aa12.99□□□□□ -0.33
SMAD3-210ENST00000559092 ACY3Q96HD9 319 aa12.99□□□□□ -0.33
SMAD3-210ENST00000559092 TENM2Q9NT68 2774 aa12.99□□□□□ -0.33
SMAD3-210ENST00000559092 MED6O75586 246 aa12.98□□□□□ -0.33
SMAD3-210ENST00000559092 TOMM40O96008 361 aa12.98□□□□□ -0.33
SMAD3-210ENST00000559092 HNRNPCP07910 306 aaKnown RBP eCLIP12.98□□□□□ -0.337e-8■□□□□ 10.3
SMAD3-210ENST00000559092 AP2S1P53680 142 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-210ENST00000559092 BAK1Q16611 211 aa12.98□□□□□ -0.33
SMAD3-210ENST00000559092 DEFB135Q30KP9 77 aa12.98□□□□□ -0.33
SMAD3-210ENST00000559092 LCE6AA0A183 80 aa12.97□□□□□ -0.33
SMAD3-210ENST00000559092 HELTA6NFD8 242 aa12.97□□□□□ -0.33
SMAD3-210ENST00000559092 MPTX1A8MV57 137 aa12.97□□□□□ -0.33
SMAD3-210ENST00000559092 NDUFB6O95139 128 aa12.97□□□□□ -0.33
SMAD3-210ENST00000559092 ATF4P18848 351 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-210ENST00000559092 CIB3Q96Q77 187 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-210ENST00000559092 RABAC1Q9UI14 185 aa12.97□□□□□ -0.33
SMAD3-210ENST00000559092 CENPXA8MT69 81 aa12.96□□□□□ -0.33
SMAD3-210ENST00000559092 K7EQG2 157 aa12.96□□□□□ -0.33
SMAD3-210ENST00000559092 IL4P05112 153 aa12.96□□□□□ -0.33
SMAD3-210ENST00000559092 DEFB131AP59861 70 aa12.96□□□□□ -0.33
SMAD3-210ENST00000559092 RAB11AP62491 216 aa12.96□□□□□ -0.33
SMAD3-210ENST00000559092 RPP30P78346 268 aaKnown RBP12.96□□□□□ -0.33
SMAD3-210ENST00000559092 GAMTQ14353 236 aa12.96□□□□□ -0.33
SMAD3-210ENST00000559092 ZNF124Q15973 351 aa12.96□□□□□ -0.33
SMAD3-210ENST00000559092 C16orf54Q6UWD8 224 aa12.96□□□□□ -0.33
SMAD3-210ENST00000559092 GATAD1Q8WUU5 269 aa12.96□□□□□ -0.33
SMAD3-210ENST00000559092 C7orf50Q9BRJ6 194 aaKnown RBP12.96□□□□□ -0.33
SMAD3-210ENST00000559092 PFDN2Q9UHV9 154 aa12.96□□□□□ -0.33
SMAD3-210ENST00000559092 PSG1P11464 419 aa12.95□□□□□ -0.34
SMAD3-210ENST00000559092 LYG2Q86SG7 212 aa12.95□□□□□ -0.34
SMAD3-210ENST00000559092 STXBP6Q8NFX7 210 aa12.95□□□□□ -0.34
SMAD3-210ENST00000559092 GLMPQ8WWB7 406 aa12.95□□□□□ -0.34
SMAD3-210ENST00000559092 SLC35E1Q96K37 410 aa12.95□□□□□ -0.34
SMAD3-210ENST00000559092 SDHCQ99643 169 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-210ENST00000559092 C9orf170A2RU37 121 aa12.94□□□□□ -0.34
SMAD3-210ENST00000559092 SYNGR2O43760 224 aa12.94□□□□□ -0.34
SMAD3-210ENST00000559092 FABP1P07148 127 aa12.94□□□□□ -0.34
SMAD3-210ENST00000559092 HOXB5P09067 269 aa12.94□□□□□ -0.34
SMAD3-210ENST00000559092 NUP62P37198 522 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-210ENST00000559092 USF2Q15853 346 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-210ENST00000559092 CNPY1Q3B7I2 92 aa12.94□□□□□ -0.34
SMAD3-210ENST00000559092 GGNBP1Q5YKI7 109 aa12.94□□□□□ -0.34
SMAD3-210ENST00000559092 FAM24BQ8N5W8 94 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms