RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 GNG7O60262 68 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 CLN5O75503 358 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 JTBO76095 146 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 YIF1AO95070 293 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 NXPH3O95157 252 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 OR5AC1P0C628 307 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 IGLC1P0CG04 106 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 PGAM2P15259 253 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 CRYBB3P26998 211 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 TFPI2P48307 235 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 TAS2R19P59542 299 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 RAB14P61106 215 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 SUPT4H1P63272 117 aaKnown RBP4.04□□□□□ -1.76
SMAD3-209ENST00000558894 ERHP84090 104 aaKnown RBP4.04□□□□□ -1.76
SMAD3-209ENST00000558894 SSBP1Q04837 148 aaKnown RBP4.04□□□□□ -1.76
SMAD3-209ENST00000558894 PMS2P11Q13670 270 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 MEF2DQ14814 521 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 OXA1LQ15070 435 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 RBMS2Q15434 407 aaKnown RBP4.04□□□□□ -1.76
SMAD3-209ENST00000558894 TRIM16LQ309B1 348 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 STEAP1BQ6NZ63 245 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 MZT2AQ6P582 158 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 TCF24Q7RTU0 167 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 TRPT1Q86TN4 253 aaKnown RBP4.04□□□□□ -1.76
SMAD3-209ENST00000558894 LINC00518Q8N0U6 118 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 GBGT1Q8N5D6 347 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 RPP25LQ8N5L8 163 aaKnown RBP4.04□□□□□ -1.76
SMAD3-209ENST00000558894 STPG3Q8N7X2 389 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 CSNK1G2-AS1Q8NCQ2 148 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 DUSP18Q8NEJ0 188 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 OR4C16Q8NGL9 310 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 OR4X1Q8NH49 305 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 OR52E5Q8NH55 327 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 DYNC2LI1Q8TCX1 351 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 DCANP1Q8TF63 244 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 SMIM4Q8WVI0 70 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 AP3S1Q92572 193 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 GPR146Q96CH1 333 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 CSTL1Q9H114 145 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 NAA60Q9H7X0 242 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 TMEM56-RWDD3S4R434 201 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 IGKV3-7A0A075B6H7 116 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 ANKRD20A5PA0PJZ0 165 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 CXorf65A6NEN9 183 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 NUPR2A6NF83 97 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 CRYM-AS1A6NIL9 109 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 MPTX1A8MV57 137 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 CORTO00230 105 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 RAB3DO95716 219 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 IFNA17P01571 189 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 C4BPBP20851 252 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 S100GP29377 79 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 SNCAP37840 140 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 NPBWR1P48145 328 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 AKR1C2P52895 323 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 CMC4P56277 68 aaPredicted RBP4.03□□□□□ -1.76
SMAD3-209ENST00000558894 NANOS2P60321 138 aaKnown RBP4.03□□□□□ -1.76
SMAD3-209ENST00000558894 PRR20EP86478 221 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 PRR20CP86479 221 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 PRR20DP86480 221 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 PRR20BP86481 221 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 PRR20AP86496 221 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 IFITM2Q01629 132 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 SURF2Q15527 256 aaPredicted RBP4.03□□□□□ -1.76
SMAD3-209ENST00000558894 C21orf62-AS1Q17RA5 79 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 TIGITQ495A1 244 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 SCGB2B2Q4G0G5 96 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 C2orf83Q53S99 150 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 NMSQ5H8A3 153 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 LEMD1Q68G75 181 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 PRSS54Q6PEW0 395 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 SLC35G3Q8N808 338 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 Q8NAQ8 132 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 ZNF680Q8NEM1 530 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 ZFAND1Q8TCF1 268 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 C15orf40Q8WUR7 153 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 GATAD1Q8WUU5 269 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 GLMPQ8WWB7 406 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 WDR12Q9GZL7 423 aaKnown RBP4.03□□□□□ -1.76
SMAD3-209ENST00000558894 SLIRPQ9GZT3 109 aaKnown RBP4.03□□□□□ -1.76
SMAD3-209ENST00000558894 C11orf68Q9H3H3 251 aaKnown RBP4.03□□□□□ -1.76
SMAD3-209ENST00000558894 PRR13Q9NZ81 148 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 COPZ2Q9P299 210 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 X6R8D5 127 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 DNAH11Q96DT5 4516 aa4.03□□□□□ -1.76
SMAD3-209ENST00000558894 PKHD1P08F94 4074 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 IGKV1D-37A0A075B6S9 117 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF705EA8MWA4 302 aaPredicted RBP4.02□□□□□ -1.77
SMAD3-209ENST00000558894 GSTZ1O43708 216 aaPredicted RBP4.02□□□□□ -1.77
SMAD3-209ENST00000558894 LY6G6CO95867 125 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 CD5P06127 495 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 RBMY1A1P0DJD3 496 aaKnown RBP4.02□□□□□ -1.77
SMAD3-209ENST00000558894 RBMY1CP0DJD4 496 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 NPPCP23582 126 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 OPRK1P41145 380 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 DEFB131AP59861 70 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 SPCS3P61009 180 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 MRPS10P82664 201 aaKnown RBP4.02□□□□□ -1.77
SMAD3-209ENST00000558894 TMEM187Q14656 261 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 RBMY1FQ15415 496 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms