RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 IGHV3-35A0A0C4DH35 117 aa13.36□□□□□ -0.27
TUBB3-211ENST00000556536 SMCO3A2RU48 225 aa13.36□□□□□ -0.27
TUBB3-211ENST00000556536 GGCTO75223 188 aaKnown RBP13.36□□□□□ -0.27
TUBB3-211ENST00000556536 IGLC1P0CG04 106 aa13.36□□□□□ -0.27
TUBB3-211ENST00000556536 HOXD3P31249 432 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-211ENST00000556536 S100A11P31949 105 aa13.36□□□□□ -0.27
TUBB3-211ENST00000556536 MYCNOSP40205 109 aa13.36□□□□□ -0.27
TUBB3-211ENST00000556536 BAXQ07812 192 aa13.36□□□□□ -0.27
TUBB3-211ENST00000556536 TIGITQ495A1 244 aa13.36□□□□□ -0.27
TUBB3-211ENST00000556536 OR4F17Q8NGA8 305 aa13.36□□□□□ -0.27
TUBB3-211ENST00000556536 OR4F4Q96R69 305 aa13.36□□□□□ -0.27
TUBB3-211ENST00000556536 NEURL2Q9BR09 285 aa13.36□□□□□ -0.27
TUBB3-211ENST00000556536 GGACTQ9BVM4 153 aa13.36□□□□□ -0.27
TUBB3-211ENST00000556536 GAR1Q9NY12 217 aaKnown RBP13.36□□□□□ -0.27
TUBB3-211ENST00000556536 IGKV1D-37A0A075B6S9 117 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 IGKV1OR2-108A0A075B7D4 117 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 RNF222A6NCQ9 220 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 M0QZ24 198 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 SCAF4O95104 1147 aaKnown RBP13.35□□□□□ -0.27
TUBB3-211ENST00000556536 IGKV1-17P01599 117 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 OR10J1P30954 320 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 HBG1P69891 147 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 HBG2P69892 147 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 AKR1C1Q04828 323 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 SPSB3Q6PJ21 355 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 LILRB2Q8N423 598 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 OR1S2Q8NGQ3 325 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 OR5C1Q8NGR4 320 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 AQP10Q96PS8 301 aa13.35□□□□□ -0.27
TUBB3-211ENST00000556536 FNDC10F2Z333 226 aa13.34□□□□□ -0.27
TUBB3-211ENST00000556536 NUPL2O15504 423 aaKnown RBP13.34□□□□□ -0.27
TUBB3-211ENST00000556536 NUP62P37198 522 aaPredicted RBP13.34□□□□□ -0.27
TUBB3-211ENST00000556536 CLINT1Q14677 625 aa13.34□□□□□ -0.27
TUBB3-211ENST00000556536 VWC2Q2TAL6 325 aa13.34□□□□□ -0.27
TUBB3-211ENST00000556536 THAP8Q8NA92 274 aa13.34□□□□□ -0.27
TUBB3-211ENST00000556536 TMEM147Q9BVK8 224 aa13.34□□□□□ -0.27
TUBB3-211ENST00000556536 SMIM3Q9BZL3 60 aa13.34□□□□□ -0.27
TUBB3-211ENST00000556536 VWFP04275 2813 aa13.34□□□□□ -0.27
TUBB3-211ENST00000556536 TRRAPQ9Y4A5 3859 aa13.34□□□□□ -0.27
TUBB3-211ENST00000556536 ARPC5O15511 151 aa13.33□□□□□ -0.28
TUBB3-211ENST00000556536 PF4P02776 101 aa13.33□□□□□ -0.28
TUBB3-211ENST00000556536 ZP3P21754 424 aa13.33□□□□□ -0.28
TUBB3-211ENST00000556536 ATP6V1FQ16864 119 aa13.33□□□□□ -0.28
TUBB3-211ENST00000556536 RPEL1Q2QD12 228 aa13.33□□□□□ -0.28
TUBB3-211ENST00000556536 TREML4Q6UXN2 200 aa13.33□□□□□ -0.28
TUBB3-211ENST00000556536 TMEM144Q7Z5S9 345 aa13.33□□□□□ -0.28
TUBB3-211ENST00000556536 INO80EQ8NBZ0 244 aaPredicted RBP13.33□□□□□ -0.28
TUBB3-211ENST00000556536 DLX4Q92988 240 aaPredicted RBP13.33□□□□□ -0.28
TUBB3-211ENST00000556536 WFDC1Q9HC57 220 aa13.33□□□□□ -0.28
TUBB3-211ENST00000556536 NPVFQ9HCQ7 196 aa13.33□□□□□ -0.28
TUBB3-211ENST00000556536 UQCC1Q9NVA1 299 aa13.33□□□□□ -0.28
TUBB3-211ENST00000556536 TRAV30A0A087WSZ9 112 aa13.32□□□□□ -0.28
TUBB3-211ENST00000556536 ZFP92A6NM28 416 aa13.32□□□□□ -0.28
TUBB3-211ENST00000556536 AP2S1P53680 142 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-211ENST00000556536 SYNJ2BPP57105 145 aa13.32□□□□□ -0.28
TUBB3-211ENST00000556536 ZNF90Q03938 601 aa13.32□□□□□ -0.28
TUBB3-211ENST00000556536 KLF5Q13887 457 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-211ENST00000556536 LINC00482Q8N8I6 264 aa13.32□□□□□ -0.28
TUBB3-211ENST00000556536 FBXL17Q9UF56 701 aa13.32□□□□□ -0.28
TUBB3-211ENST00000556536 UBE2L5PA0A1B0GUS4 154 aa13.31□□□□□ -0.28
TUBB3-211ENST00000556536 HMSDA8MTL9 139 aa13.31□□□□□ -0.28
TUBB3-211ENST00000556536 C1QBP02746 253 aa13.31□□□□□ -0.28
TUBB3-211ENST00000556536 DEFA6Q01524 100 aa13.31□□□□□ -0.28
TUBB3-211ENST00000556536 UNQ9165/PRO28630Q6UXU0 137 aa13.31□□□□□ -0.28
TUBB3-211ENST00000556536 GPHB5Q86YW7 130 aa13.31□□□□□ -0.28
TUBB3-211ENST00000556536 TRGV9Q99603 122 aa13.31□□□□□ -0.28
TUBB3-211ENST00000556536 ATP5SQ99766 215 aa13.31□□□□□ -0.28
TUBB3-211ENST00000556536 MFFQ9GZY8 342 aa13.31□□□□□ -0.28
TUBB3-211ENST00000556536 WDR83OSQ9Y284 106 aa13.31□□□□□ -0.28
TUBB3-211ENST00000556536 LSM4Q9Y4Z0 139 aaKnown RBP13.31□□□□□ -0.28
TUBB3-211ENST00000556536 CMYA5Q8N3K9 4069 aa13.3□□□□□ -0.28
TUBB3-211ENST00000556536 IGHV3OR16-8A0A075B7F1 116 aa13.3□□□□□ -0.28
TUBB3-211ENST00000556536 YPEL3P61236 119 aaPredicted RBP13.3□□□□□ -0.28
TUBB3-211ENST00000556536 RELQ04864 619 aaPredicted RBP13.3□□□□□ -0.28
TUBB3-211ENST00000556536 ZNF600Q6ZNG1 722 aa13.3□□□□□ -0.28
TUBB3-211ENST00000556536 TMEM182Q6ZP80 229 aaPredicted RBP13.3□□□□□ -0.28
TUBB3-211ENST00000556536 C1QL4Q86Z23 238 aa13.3□□□□□ -0.28
TUBB3-211ENST00000556536 RCC1LQ96I51 464 aaKnown RBP13.3□□□□□ -0.28
TUBB3-211ENST00000556536 PUS1Q9Y606 427 aaKnown RBP eCLIP13.3□□□□□ -0.28
TUBB3-211ENST00000556536 ZNF320A2RRD8 509 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 NDUFA4O00483 81 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 SCGB2A1O75556 95 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 RD3LP0DJH9 198 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 PSG1P11464 419 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 CXCL2P19875 107 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 OR2F1Q13607 317 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 FAM106AQ4KMX7 169 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 TEPPQ6URK8 271 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 BTNL8Q6UX41 500 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 TOMM20LQ6UXN7 152 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 MGST2Q99735 147 aa13.29□□□□□ -0.28
TUBB3-211ENST00000556536 YIF1AO95070 293 aa13.28□□□□□ -0.28
TUBB3-211ENST00000556536 TOMM40O96008 361 aa13.28□□□□□ -0.28
TUBB3-211ENST00000556536 FGF7P21781 194 aa13.28□□□□□ -0.28
TUBB3-211ENST00000556536 GATA2P23769 480 aaPredicted RBP13.28□□□□□ -0.28
TUBB3-211ENST00000556536 EIF2B2P49770 351 aaKnown RBP13.28□□□□□ -0.28
TUBB3-211ENST00000556536 CYP2G1PQ6ZSU1 146 aa13.28□□□□□ -0.28
TUBB3-211ENST00000556536 REC114Q7Z4M0 266 aa13.28□□□□□ -0.28
TUBB3-211ENST00000556536 Q8WTZ3 238 aa13.28□□□□□ -0.28
TUBB3-211ENST00000556536 TMEM190Q8WZ59 177 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms