RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 C9orf66Q5T8R8 295 aa16.4■□□□□ 0.22
NEK3-202ENST00000550841 ZNF600Q6ZNG1 722 aa16.4■□□□□ 0.22
NEK3-202ENST00000550841 STX12Q86Y82 276 aa16.4■□□□□ 0.22
NEK3-202ENST00000550841 TMEM252Q8N6L7 170 aa16.4■□□□□ 0.22
NEK3-202ENST00000550841 THAP6Q8TBB0 222 aa16.4■□□□□ 0.22
NEK3-202ENST00000550841 WDR89Q96FK6 387 aaPredicted RBP16.4■□□□□ 0.22
NEK3-202ENST00000550841 UFC1Q9Y3C8 167 aa16.4■□□□□ 0.22
NEK3-202ENST00000550841 SEC14L6B5MCN3 397 aa16.39■□□□□ 0.21
NEK3-202ENST00000550841 FABP1P07148 127 aa16.39■□□□□ 0.21
NEK3-202ENST00000550841 SULT1A1P50225 295 aa16.39■□□□□ 0.21
NEK3-202ENST00000550841 ELLP55199 621 aaPredicted RBP16.39■□□□□ 0.21
NEK3-202ENST00000550841 YPEL3P61236 119 aaPredicted RBP16.39■□□□□ 0.21
NEK3-202ENST00000550841 Q6ZNX1 250 aa16.39■□□□□ 0.21
NEK3-202ENST00000550841 RNF126Q9BV68 326 aa16.39■□□□□ 0.21
NEK3-202ENST00000550841 OR5AC2Q9NZP5 309 aa16.39■□□□□ 0.21
NEK3-202ENST00000550841 MGAM2Q2M2H8 2515 aa16.39■□□□□ 0.21
NEK3-202ENST00000550841 IGHV3-35A0A0C4DH35 117 aa16.38■□□□□ 0.21
NEK3-202ENST00000550841 H0YIZ8 118 aa16.38■□□□□ 0.21
NEK3-202ENST00000550841 YIF1AO95070 293 aa16.38■□□□□ 0.21
NEK3-202ENST00000550841 IGLC1P0CG04 106 aa16.38■□□□□ 0.21
NEK3-202ENST00000550841 IGLL1P15814 213 aa16.38■□□□□ 0.21
NEK3-202ENST00000550841 S100A11P31949 105 aa16.38■□□□□ 0.21
NEK3-202ENST00000550841 HBG1P69891 147 aa16.38■□□□□ 0.21
NEK3-202ENST00000550841 HBG2P69892 147 aa16.38■□□□□ 0.21
NEK3-202ENST00000550841 Q8WTZ3 238 aa16.38■□□□□ 0.21
NEK3-202ENST00000550841 TRRAPQ9Y4A5 3859 aa16.38■□□□□ 0.21
NEK3-202ENST00000550841 ZFP92A6NM28 416 aa16.37■□□□□ 0.21
NEK3-202ENST00000550841 IGKV1-17P01599 117 aa16.37■□□□□ 0.21
NEK3-202ENST00000550841 AKR1C1Q04828 323 aa16.37■□□□□ 0.21
NEK3-202ENST00000550841 TIGITQ495A1 244 aa16.37■□□□□ 0.21
NEK3-202ENST00000550841 ACOT7LQ6ZUV0 252 aa16.37■□□□□ 0.21
NEK3-202ENST00000550841 TMEM144Q7Z5S9 345 aa16.37■□□□□ 0.21
NEK3-202ENST00000550841 NPVFQ9HCQ7 196 aa16.37■□□□□ 0.21
NEK3-202ENST00000550841 SIGLEC8Q9NYZ4 499 aa16.37■□□□□ 0.21
NEK3-202ENST00000550841 SMCO3A2RU48 225 aa16.36■□□□□ 0.21
NEK3-202ENST00000550841 K7EMT4 169 aa16.36■□□□□ 0.21
NEK3-202ENST00000550841 CCNKO75909 580 aa16.36■□□□□ 0.21
NEK3-202ENST00000550841 CST7O76096 145 aa16.36■□□□□ 0.21
NEK3-202ENST00000550841 ATP6V1FQ16864 119 aa16.36■□□□□ 0.21
NEK3-202ENST00000550841 THAP8Q8NA92 274 aa16.36■□□□□ 0.21
NEK3-202ENST00000550841 TMEM190Q8WZ59 177 aa16.36■□□□□ 0.21
NEK3-202ENST00000550841 MARC2Q969Z3 335 aa16.36■□□□□ 0.21
NEK3-202ENST00000550841 MBD2Q9UBB5 411 aa16.36■□□□□ 0.21
NEK3-202ENST00000550841 ZMAT5Q9UDW3 170 aaKnown RBP16.36■□□□□ 0.21
NEK3-202ENST00000550841 MEGF8Q7Z7M0 2845 aa16.36■□□□□ 0.21
NEK3-202ENST00000550841 IGSF23A1L1A6 192 aa16.35■□□□□ 0.21
NEK3-202ENST00000550841 A8MWP6 167 aa16.35■□□□□ 0.21
NEK3-202ENST00000550841 SAP30O75446 220 aa16.35■□□□□ 0.21
NEK3-202ENST00000550841 RD3LP0DJH9 198 aa16.35■□□□□ 0.21
NEK3-202ENST00000550841 LYL1P12980 280 aa16.35■□□□□ 0.21
NEK3-202ENST00000550841 BAXQ07812 192 aa16.35■□□□□ 0.21
NEK3-202ENST00000550841 SLC38A11Q08AI6 406 aa16.35■□□□□ 0.21
NEK3-202ENST00000550841 TRGV9Q99603 122 aa16.35■□□□□ 0.21
NEK3-202ENST00000550841 GINS3Q9BRX5 216 aa16.35■□□□□ 0.21
NEK3-202ENST00000550841 C20orf24Q9BUV8 137 aa16.35■□□□□ 0.21
NEK3-202ENST00000550841 PUS1Q9Y606 427 aaKnown RBP eCLIP16.35■□□□□ 0.21
NEK3-202ENST00000550841 CSN3P07498 182 aa16.34■□□□□ 0.21
NEK3-202ENST00000550841 ARL16Q0P5N6 197 aa16.34■□□□□ 0.21
NEK3-202ENST00000550841 TOMM20LQ6UXN7 152 aa16.34■□□□□ 0.21
NEK3-202ENST00000550841 UNQ9165/PRO28630Q6UXU0 137 aa16.34■□□□□ 0.21
NEK3-202ENST00000550841 IL34Q6ZMJ4 242 aa16.34■□□□□ 0.21
NEK3-202ENST00000550841 HAPLN4Q86UW8 402 aa16.34■□□□□ 0.21
NEK3-202ENST00000550841 LILRB2Q8N423 598 aa16.34■□□□□ 0.21
NEK3-202ENST00000550841 TMEM217Q8N7C4 229 aa16.34■□□□□ 0.21
NEK3-202ENST00000550841 DAZ1Q9NQZ3 744 aaKnown RBP16.34■□□□□ 0.21
NEK3-202ENST00000550841 NOTCH3Q9UM47 2321 aa16.34■□□□□ 0.21
NEK3-202ENST00000550841 C2orf70A6NJV1 201 aa16.33■□□□□ 0.2
NEK3-202ENST00000550841 TOMM40O96008 361 aa16.33■□□□□ 0.2
NEK3-202ENST00000550841 CFDP00746 253 aaPredicted RBP16.33■□□□□ 0.2
NEK3-202ENST00000550841 NUP62P37198 522 aaPredicted RBP16.33■□□□□ 0.2
NEK3-202ENST00000550841 EWSR1Q01844 656 aaKnown RBP eCLIP16.33■□□□□ 0.2
NEK3-202ENST00000550841 OXLD1Q5BKU9 147 aa16.33■□□□□ 0.2
NEK3-202ENST00000550841 MRPL27Q9P0M9 148 aaKnown RBP16.33■□□□□ 0.2
NEK3-202ENST00000550841 TRAV14DV4A0A0A6YYC5 116 aa16.32■□□□□ 0.2
NEK3-202ENST00000550841 FOLR2P14207 255 aa16.32■□□□□ 0.2
NEK3-202ENST00000550841 CBLN1P23435 193 aa16.32■□□□□ 0.2
NEK3-202ENST00000550841 RPL12P30050 165 aaKnown RBP16.32■□□□□ 0.2
NEK3-202ENST00000550841 TM4SF20Q53R12 229 aa16.32■□□□□ 0.2
NEK3-202ENST00000550841 SAMD5Q5TGI4 173 aa16.32■□□□□ 0.2
NEK3-202ENST00000550841 TEPPQ6URK8 271 aa16.32■□□□□ 0.2
NEK3-202ENST00000550841 OR2T35Q8NGX2 323 aa16.32■□□□□ 0.2
NEK3-202ENST00000550841 UQCC1Q9NVA1 299 aa16.32■□□□□ 0.2
NEK3-202ENST00000550841 IGKV1D-37A0A075B6S9 117 aa16.31■□□□□ 0.2
NEK3-202ENST00000550841 TMEM213A2RRL7 107 aa16.31■□□□□ 0.2
NEK3-202ENST00000550841 BMI1P35226 326 aa16.31■□□□□ 0.2
NEK3-202ENST00000550841 NHLH2Q02577 135 aa16.31■□□□□ 0.2
NEK3-202ENST00000550841 RAB31Q13636 194 aa16.31■□□□□ 0.2
NEK3-202ENST00000550841 OR51G1Q8NGK1 321 aa16.31■□□□□ 0.2
NEK3-202ENST00000550841 CHAC2Q8WUX2 184 aa16.31■□□□□ 0.2
NEK3-202ENST00000550841 TMEM147Q9BVK8 224 aa16.31■□□□□ 0.2
NEK3-202ENST00000550841 TECRQ9NZ01 308 aaKnown RBP16.31■□□□□ 0.2
NEK3-202ENST00000550841 VWFP04275 2813 aa16.31■□□□□ 0.2
NEK3-202ENST00000550841 C8orf88P0DMB2 117 aa16.3■□□□□ 0.2
NEK3-202ENST00000550841 PSG1P11464 419 aa16.3■□□□□ 0.2
NEK3-202ENST00000550841 SELENOTP62341 195 aa16.3■□□□□ 0.2
NEK3-202ENST00000550841 DYNLRB2Q8TF09 96 aa16.3■□□□□ 0.2
NEK3-202ENST00000550841 ZFAND3Q9H8U3 227 aa16.3■□□□□ 0.2
NEK3-202ENST00000550841 IGKV1OR2-108A0A075B7D4 117 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 G3V4G9 280 aa16.29■□□□□ 0.2
NEK3-202ENST00000550841 NPPCP23582 126 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms