RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 DEFA4P12838 97 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 MYOD1P15172 320 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 CXCL3P19876 107 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 PVALBP20472 110 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-213ENST00000550629 MDKP21741 143 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-213ENST00000550629 PSMB8P28062 276 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 FGL1Q08830 312 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 FCN2Q15485 313 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 ECSCRQ19T08 205 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 C2orf68Q2NKX9 166 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 TMEM95Q3KNT9 176 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 KLHDC1Q8N7A1 406 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 SLC24A4Q8NFF2 622 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 OR5AU1Q8NGC0 362 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 OR11H7Q8NGC8 314 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 OR10W1Q8NGF6 305 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 OR4X2Q8NGF9 303 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 MYOZ3Q8TDC0 251 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 RNASEH2CQ8TDP1 164 aaKnown RBP4.45□□□□□ -1.7
SCAF11-213ENST00000550629 URB1-AS1Q96HZ7 61 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 USMG5Q96IX5 58 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 SMIM8Q96KF7 97 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 NOL4LQ96MY1 436 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-213ENST00000550629 P2RX4Q99571 388 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 FAM103A1Q9BTL3 118 aaKnown RBP4.45□□□□□ -1.7
SCAF11-213ENST00000550629 ANK3Q12955 4377 aaKnown RBP4.45□□□□□ -1.7
SCAF11-213ENST00000550629 ZFHX3Q15911 3703 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 COL6A5A8TX70 2615 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 GAGE12JA6NER3 117 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 E5RGE8 158 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 K7EPK0 472 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 L7N2F9 121 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 SSSCA1O60232 199 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 SOX15O60248 233 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 DEDDO75618 318 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 RNASE2P10153 161 aaKnown RBP4.44□□□□□ -1.7
SCAF11-213ENST00000550629 NPY1RP25929 384 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 RAB9AP51151 201 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 POLR2GP62487 172 aaKnown RBP eCLIP4.44□□□□□ -1.7
SCAF11-213ENST00000550629 RPL23AP62750 156 aaKnown RBP4.44□□□□□ -1.7
SCAF11-213ENST00000550629 VAMP2P63027 116 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 RHOGP84095 191 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 EXOSC2Q13868 293 aaKnown RBP4.44□□□□□ -1.7
SCAF11-213ENST00000550629 C2orf83Q53S99 150 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 TMEM217Q8N7C4 229 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 OR5T1Q8NG75 326 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 VN1R17PQ8TDU5 208 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 PPP1R1CQ8WVI7 109 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 CXorf58Q96LI9 332 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 UBE2E2Q96LR5 201 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 MAGT1Q9H0U3 335 aa4.44□□□□□ -1.7
SCAF11-213ENST00000550629 SEPSECSQ9HD40 501 aaKnown RBP4.44□□□□□ -1.7
SCAF11-213ENST00000550629 RCL1Q9Y2P8 373 aaKnown RBP4.44□□□□□ -1.7
SCAF11-213ENST00000550629 STRAPQ9Y3F4 350 aaKnown RBP4.44□□□□□ -1.7
SCAF11-213ENST00000550629 TRBV7-1A0A0A6YYK4 115 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 FNDC10F2Z333 226 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 SIX6O95475 246 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 MPC2O95563 127 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 TMEM50AO95807 157 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 IFNA10P01566 189 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 TRGV3P03979 118 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 REG1AP05451 166 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 APELAP0DMC3 54 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 SLC25A4P12235 298 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 LYL1P12980 280 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 FCGR2BP31994 310 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-213ENST00000550629 GPX4P36969 197 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-213ENST00000550629 P2RY1P47900 373 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 CDX1P47902 265 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-213ENST00000550629 MFAP2P55001 183 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 PAX9P55771 341 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 TPPP2P59282 170 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 S100A10P60903 97 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 RAB11AP62491 216 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 RUNX1Q01196 453 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 ATP5G2Q06055 141 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 SPINK9Q5DT21 86 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 TCTEX1D4Q5JR98 221 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 ETFRF1Q6IPR1 90 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 PRSS54Q6PEW0 395 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 ZNF329Q86UD4 541 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 NDUFA11Q86Y39 141 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 THAP6Q8TBB0 222 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 CACNG8Q8WXS5 425 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 TXN2Q99757 166 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 CITED1Q99966 193 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 GGACTQ9BVM4 153 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 C11orf1Q9H5F2 150 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 ZNF355PQ9NSJ1 428 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 LYRM2Q9NU23 88 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-213ENST00000550629 LINC00527Q9UJ94 153 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 TSSC4Q9Y5U2 329 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-213ENST00000550629 CUBNO60494 3623 aa4.43□□□□□ -1.7
SCAF11-213ENST00000550629 TCRBV4S1A1TA0A5B7 111 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 C15orf62A8K5M9 175 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 I3L2K1 104 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 SCGB2A1O75556 95 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 IFNA4P05014 189 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 LGALS1P09382 135 aaKnown RBP4.42□□□□□ -1.7
SCAF11-213ENST00000550629 OR8U8P0C7N1 319 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms