RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 SIGLEC8Q9NYZ4 499 aa15.81■□□□□ 0.12
SCARB1-211ENST00000546215 TMEM213A2RRL7 107 aa15.8■□□□□ 0.12
SCARB1-211ENST00000546215 C2orf70A6NJV1 201 aa15.8■□□□□ 0.12
SCARB1-211ENST00000546215 OR10J1P30954 320 aa15.8■□□□□ 0.12
SCARB1-211ENST00000546215 LRRC37A5PQ49AS3 106 aa15.8■□□□□ 0.12
SCARB1-211ENST00000546215 OR8G2PQ6IF36 304 aa15.8■□□□□ 0.12
SCARB1-211ENST00000546215 ADAMTSL5Q6ZMM2 481 aa15.8■□□□□ 0.12
SCARB1-211ENST00000546215 SLC35E1Q96K37 410 aa15.8■□□□□ 0.12
SCARB1-211ENST00000546215 H0YIZ8 118 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 EDN2P20800 178 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 RRAS2P62070 204 aaPredicted RBP15.79■□□□□ 0.12
SCARB1-211ENST00000546215 EGFEM1PQ0D2K5 195 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 TIGITQ495A1 244 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 TM4SF20Q53R12 229 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 ZNF600Q6ZNG1 722 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 OR1S2Q8NGQ3 325 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 LYRM2Q9NU23 88 aaPredicted RBP15.79■□□□□ 0.12
SCARB1-211ENST00000546215 IGHV3OR16-8A0A075B7F1 116 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 FAM24AA6NFZ4 105 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 SCGB2A1O75556 95 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 BCAP31P51572 246 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 CAV2P51636 162 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 ELLP55199 621 aaPredicted RBP15.79■□□□□ 0.12
SCARB1-211ENST00000546215 ARL16Q0P5N6 197 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 TOMM20LQ6UXN7 152 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 ACOT7LQ6ZUV0 252 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 HAPLN4Q86UW8 402 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 OR5AC2Q9NZP5 309 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 UFC1Q9Y3C8 167 aa15.79■□□□□ 0.12
SCARB1-211ENST00000546215 YIF1AO95070 293 aa15.78■□□□□ 0.12
SCARB1-211ENST00000546215 RLN2P04090 185 aa15.78■□□□□ 0.12
SCARB1-211ENST00000546215 FOLR2P14207 255 aa15.78■□□□□ 0.12
SCARB1-211ENST00000546215 OR10P1Q8NGE3 313 aa15.78■□□□□ 0.12
SCARB1-211ENST00000546215 C20orf24Q9BUV8 137 aa15.78■□□□□ 0.12
SCARB1-211ENST00000546215 PUS1Q9Y606 427 aaKnown RBP eCLIP15.78■□□□□ 0.12
SCARB1-211ENST00000546215 IGKV1D-37A0A075B6S9 117 aa15.77■□□□□ 0.11
SCARB1-211ENST00000546215 IGKV1OR2-108A0A075B7D4 117 aa15.77■□□□□ 0.11
SCARB1-211ENST00000546215 MPC2O95563 127 aa15.77■□□□□ 0.11
SCARB1-211ENST00000546215 IGLV1-51P01701 117 aa15.77■□□□□ 0.11
SCARB1-211ENST00000546215 CBLN1P23435 193 aa15.77■□□□□ 0.11
SCARB1-211ENST00000546215 KRTAP10-11P60412 298 aa15.77■□□□□ 0.11
SCARB1-211ENST00000546215 YPEL3P61236 119 aaPredicted RBP15.77■□□□□ 0.11
SCARB1-211ENST00000546215 RNF126Q9BV68 326 aa15.77■□□□□ 0.11
SCARB1-211ENST00000546215 ZFAND3Q9H8U3 227 aa15.77■□□□□ 0.11
SCARB1-211ENST00000546215 DAZ1Q9NQZ3 744 aaKnown RBP15.77■□□□□ 0.11
SCARB1-211ENST00000546215 MEGF8Q7Z7M0 2845 aa15.76■□□□□ 0.11
SCARB1-211ENST00000546215 E5RGE8 158 aa15.76■□□□□ 0.11
SCARB1-211ENST00000546215 K7EMT4 169 aa15.76■□□□□ 0.11
SCARB1-211ENST00000546215 C8orf88P0DMB2 117 aa15.76■□□□□ 0.11
SCARB1-211ENST00000546215 DLK1P80370 383 aa15.76■□□□□ 0.11
SCARB1-211ENST00000546215 TMEM252Q8N6L7 170 aa15.76■□□□□ 0.11
SCARB1-211ENST00000546215 THAP8Q8NA92 274 aa15.76■□□□□ 0.11
SCARB1-211ENST00000546215 SORL1Q92673 2214 aa15.75■□□□□ 0.11
SCARB1-211ENST00000546215 IGSF23A1L1A6 192 aa15.75■□□□□ 0.11
SCARB1-211ENST00000546215 ZFP92A6NM28 416 aa15.75■□□□□ 0.11
SCARB1-211ENST00000546215 ZNF207O43670 478 aaKnown RBP15.75■□□□□ 0.11
SCARB1-211ENST00000546215 CST7O76096 145 aa15.75■□□□□ 0.11
SCARB1-211ENST00000546215 MARC2Q969Z3 335 aa15.75■□□□□ 0.11
SCARB1-211ENST00000546215 MRPL27Q9P0M9 148 aaKnown RBP15.75■□□□□ 0.11
SCARB1-211ENST00000546215 FNDC10F2Z333 226 aa15.74■□□□□ 0.11
SCARB1-211ENST00000546215 TOMM40O96008 361 aa15.74■□□□□ 0.11
SCARB1-211ENST00000546215 PET100P0DJ07 73 aa15.74■□□□□ 0.11
SCARB1-211ENST00000546215 P2RY1P47900 373 aa15.74■□□□□ 0.11
SCARB1-211ENST00000546215 SULT1A1P50225 295 aa15.74■□□□□ 0.11
SCARB1-211ENST00000546215 ZNF90Q03938 601 aa15.74■□□□□ 0.11
SCARB1-211ENST00000546215 TMEM144Q7Z5S9 345 aa15.74■□□□□ 0.11
SCARB1-211ENST00000546215 Q8WTZ3 238 aa15.74■□□□□ 0.11
SCARB1-211ENST00000546215 TRGV9Q99603 122 aa15.74■□□□□ 0.11
SCARB1-211ENST00000546215 GGACTQ9BVM4 153 aa15.74■□□□□ 0.11
SCARB1-211ENST00000546215 RD3LP0DJH9 198 aa15.73■□□□□ 0.11
SCARB1-211ENST00000546215 PSG1P11464 419 aa15.73■□□□□ 0.11
SCARB1-211ENST00000546215 AKR1C1Q04828 323 aa15.73■□□□□ 0.11
SCARB1-211ENST00000546215 DEFB114Q30KQ6 69 aa15.73■□□□□ 0.11
SCARB1-211ENST00000546215 TMEM217Q8N7C4 229 aa15.73■□□□□ 0.11
SCARB1-211ENST00000546215 MLXQ9UH92 298 aa15.73■□□□□ 0.11
SCARB1-211ENST00000546215 TRAV14DV4A0A0A6YYC5 116 aa15.72■□□□□ 0.11
SCARB1-211ENST00000546215 SMCO3A2RU48 225 aa15.72■□□□□ 0.11
SCARB1-211ENST00000546215 SCAF4O95104 1147 aaKnown RBP15.72■□□□□ 0.11
SCARB1-211ENST00000546215 GIPP09681 153 aaPredicted RBP15.72■□□□□ 0.11
SCARB1-211ENST00000546215 SLC38A11Q08AI6 406 aa15.72■□□□□ 0.11
SCARB1-211ENST00000546215 STX12Q86Y82 276 aa15.72■□□□□ 0.11
SCARB1-211ENST00000546215 ASB13Q8WXK3 278 aa15.72■□□□□ 0.11
SCARB1-211ENST00000546215 GINS3Q9BRX5 216 aa15.72■□□□□ 0.11
SCARB1-211ENST00000546215 NPVFQ9HCQ7 196 aa15.72■□□□□ 0.11
SCARB1-211ENST00000546215 ZMAT5Q9UDW3 170 aaKnown RBP15.72■□□□□ 0.11
SCARB1-211ENST00000546215 LYL1P12980 280 aa15.71■□□□□ 0.11
SCARB1-211ENST00000546215 DYNLRB2Q8TF09 96 aa15.71■□□□□ 0.11
SCARB1-211ENST00000546215 TECRQ9NZ01 308 aaKnown RBP15.71■□□□□ 0.11
SCARB1-211ENST00000546215 MBD2Q9UBB5 411 aa15.71■□□□□ 0.11
SCARB1-211ENST00000546215 IGHV7-4-1A0A0J9YVY3 117 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 S100A11P31949 105 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 CD300EQ496F6 205 aaPredicted RBP15.7■□□□□ 0.1
SCARB1-211ENST00000546215 SLC25A31Q9H0C2 315 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 SMPXQ9UHP9 88 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 IZUMO1RA6ND01 250 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 PRB2P02812 416 aaPredicted RBP15.7■□□□□ 0.1
SCARB1-211ENST00000546215 IL4P05112 153 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 HBG1P69891 147 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 HBG2P69892 147 aa15.7■□□□□ 0.1
SCARB1-211ENST00000546215 EWSR1Q01844 656 aaKnown RBP eCLIP15.7■□□□□ 0.18e-7■■■□□ 16.1
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms