RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 Q6AWC8 147 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 IGFL3Q6UXB1 125 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 Q6ZN92 141 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF329Q86UD4 541 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 VASH2Q86V25 355 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 DOLPP1Q86YN1 238 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 VKORC1L1Q8N0U8 176 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 ARL6IP6Q8N6S5 226 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 TEX45Q8NA69 505 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 C5orf17Q8NAS9 161 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF738Q8NE65 137 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 ITLN1Q8WWA0 313 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 HARBI1Q96MB7 349 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 ATG101Q9BSB4 218 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 ALKBH7Q9BT30 221 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-225ENST00000545920 NDFIP1Q9BT67 221 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 DCTN5Q9BTE1 182 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 SLC25A2Q9BXI2 301 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 PRSS22Q9GZN4 317 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 MS4A6AQ9H2W1 248 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 TNFRSF19Q9NS68 423 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 SERTAD4Q9NUC0 356 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 TMEM14CQ9P0S9 112 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 EPDR1Q9UM22 224 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 WASHC3Q9Y3C0 194 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-225ENST00000545920 ARHGAP21Q5T5U3 1957 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 IGKV1OR2-108A0A075B7D4 117 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 A0A1B0GUS0 222 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 FBLL1A6NHQ2 334 aaKnown RBP5.22□□□□□ -1.57
SNHG1-225ENST00000545920 PRSS29PA6NIE9 313 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 K7EP13 123 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 M0R2Z0 102 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 ACTL6BO94805 426 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 FSTL3O95633 263 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 LIPFP07098 398 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 SP9P0CG40 484 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 GYPEP15421 78 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 HNF1AP20823 631 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 G0S2P27469 103 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 TSPOP30536 169 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 MFAP2P55001 183 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 FOXA3P55318 350 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-225ENST00000545920 KIAA2026Q5HYC2 2103 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 FAM53AQ6NSI3 398 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-225ENST00000545920 RBPMS2Q6ZRY4 209 aaKnown RBP5.22□□□□□ -1.57
SNHG1-225ENST00000545920 MED12LQ86YW9 2145 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 LYPD1Q8N2G4 141 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 ZADH2Q8N4Q0 377 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 RBMXL3Q8N7X1 1067 aaKnown RBP5.22□□□□□ -1.57
SNHG1-225ENST00000545920 GATD1Q8NB37 220 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 ZNRF1Q8ND25 227 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 NUP35Q8NFH5 326 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 NUDT10Q8NFP7 164 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 DPF1Q92782 380 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 NUDT11Q96G61 164 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 RNF5Q99942 180 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 TMEM70Q9BUB7 260 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 MLST8Q9BVC4 326 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 HINT2Q9BX68 163 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 TMEM191AQ9H0A3 160 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 RNASE7Q9H1E1 156 aaKnown RBP5.22□□□□□ -1.57
SNHG1-225ENST00000545920 RPP21Q9H633 154 aaKnown RBP5.22□□□□□ -1.57
SNHG1-225ENST00000545920 OTORQ9NRC9 128 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF355PQ9NSJ1 428 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 HSPB8Q9UJY1 196 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 FREM1Q5H8C1 2179 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 DOCK10Q96BY6 2186 aa5.22□□□□□ -1.57
SNHG1-225ENST00000545920 USF3Q68DE3 2245 aa5.21□□□□□ -1.57
SNHG1-225ENST00000545920 CHD3Q12873 2000 aaKnown RBP5.21□□□□□ -1.57
SNHG1-225ENST00000545920 IGHV3-64DA0A0J9YX35 117 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 SERTM2A0A1B0GWG4 89 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 HSBP1L1C9JCN9 74 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 NPIPB6E9PJ23 425 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 CDX4O14627 284 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-225ENST00000545920 LTAP01374 205 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 IGHV1-46P01743 117 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 RBP4P02753 201 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 S100A7P31151 101 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 CASP6P55212 293 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 LINC00205P59089 165 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 C1orf185Q5T7R7 199 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 MRPL54Q6P161 138 aaKnown RBP5.21□□□□□ -1.58
SNHG1-225ENST00000545920 C12orf54Q6X4T0 127 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 SPATA12Q7Z6I5 190 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 MUC15Q8N387 334 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 C11orf42Q8N5U0 333 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 TMEM116Q8NCL8 245 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 OR9G1Q8NH87 305 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 FXYD5Q96DB9 178 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 SNRNP40Q96DI7 357 aaKnown RBP5.21□□□□□ -1.58
SNHG1-225ENST00000545920 DAZAP1Q96EP5 407 aaKnown RBP5.21□□□□□ -1.58
SNHG1-225ENST00000545920 FAM103A1Q9BTL3 118 aaKnown RBP5.21□□□□□ -1.58
SNHG1-225ENST00000545920 C1orf43Q9BWL3 253 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 CLEC7AQ9BXN2 247 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 KAAG1Q9UBP8 84 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 COX11Q9Y6N1 276 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 ZNF407Q9C0G0 2248 aa5.21□□□□□ -1.58
SNHG1-225ENST00000545920 CACNA1GO43497 2377 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms