RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 ARV1Q9H2C2 271 aa12.42□□□□□ -0.42
PRPF40A-212ENST00000545856 TCRBV4S1A1TA0A5B7 111 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 ZFP92A6NM28 416 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 BOLA2-SMG1P6H3BVE0 249 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 TGOLN2O43493 480 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 OR10J1P30954 320 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 S100A7P31151 101 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 OPCMLQ14982 345 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 KRTAP24-1Q3LI83 254 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 AWAT1Q58HT5 328 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 BTNL8Q6UX41 500 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 ZNF709Q8N972 641 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 NPIPB3Q92617 1050 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 CCDC140Q96MF4 163 aa12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 PEF1Q9UBV8 284 aaKnown RBP12.41□□□□□ -0.42
PRPF40A-212ENST00000545856 TENM1Q9UKZ4 2725 aa12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 F8W735 103 aaPredicted RBP12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 RPL29P47914 159 aaKnown RBP12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 CAMLGP49069 296 aa12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 SERF2P84101 59 aa12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 TCTEX1D4Q5JR98 221 aa12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 S100A7AQ86SG5 101 aa12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 NDUFA11Q86Y39 141 aa12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 PHYHIPLQ96FC7 376 aa12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 GINS3Q9BRX5 216 aa12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 ZNF471Q9BX82 626 aaPredicted RBP12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 NPCDR1Q9BY65 106 aa12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 SMIM3Q9BZL3 60 aa12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 CYTL1Q9NRR1 136 aa12.4□□□□□ -0.42
PRPF40A-212ENST00000545856 GGCTO75223 188 aaKnown RBP12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 CLEC3BP05452 202 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 CTSGP08311 255 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 ZP3P21754 424 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 FGF7P21781 194 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 RIPPLY3P57055 190 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 C10orf99Q6UWK7 81 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 ZNF600Q6ZNG1 722 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 BAP18Q8IXM2 172 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 BPIFCQ8NFQ6 507 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 OR2G3Q8NGZ4 309 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 C19orf24Q9BVV8 132 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 WFDC1Q9HC57 220 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 RNF24Q9Y225 148 aa12.39□□□□□ -0.43
PRPF40A-212ENST00000545856 IGKV1OR2-108A0A075B7D4 117 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 I3L521 148 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 HAX1O00165 279 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 AGPAT2O15120 278 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 OR2C1O95371 312 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 TOMM40O96008 361 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 IGKV1-17P01599 117 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 HSPB1P04792 205 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 SEC11BP0C7V7 166 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 GPR183P32249 361 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 ARL3P36405 182 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 RPL7L1Q6DKI1 246 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 LURAP1LQ8IV03 231 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 MRPL36Q9P0J6 103 aaKnown RBP12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 SLC45A2Q9UMX9 530 aa12.38□□□□□ -0.43
PRPF40A-212ENST00000545856 IGKV1D-37A0A075B6S9 117 aa12.37□□□□□ -0.43
PRPF40A-212ENST00000545856 NDUFA4O00483 81 aa12.37□□□□□ -0.43
PRPF40A-212ENST00000545856 MBP02144 154 aa12.37□□□□□ -0.43
PRPF40A-212ENST00000545856 NKX2-5P52952 324 aaPredicted RBP12.37□□□□□ -0.43
PRPF40A-212ENST00000545856 MLANAQ16655 118 aa12.37□□□□□ -0.43
PRPF40A-212ENST00000545856 CLEC19AQ6UXS0 136 aa12.37□□□□□ -0.43
PRPF40A-212ENST00000545856 CYP2G1PQ6ZSU1 146 aa12.37□□□□□ -0.43
PRPF40A-212ENST00000545856 Q8WTZ3 238 aa12.37□□□□□ -0.43
PRPF40A-212ENST00000545856 MGST2Q99735 147 aa12.37□□□□□ -0.43
PRPF40A-212ENST00000545856 CITED1Q99966 193 aa12.37□□□□□ -0.43
PRPF40A-212ENST00000545856 GGTLC1Q9BX51 225 aa12.37□□□□□ -0.43
PRPF40A-212ENST00000545856 STAB1Q9NY15 2570 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 IGHV3-21A0A0B4J1V1 117 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 OR2T8A6NH00 312 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 CD28P10747 220 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 PLP1P60201 277 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 PRR20EP86478 221 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 PRR20CP86479 221 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 PRR20DP86480 221 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 PRR20BP86481 221 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 PRR20AP86496 221 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 SRSF2Q01130 221 aaKnown RBP12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 Q6ZRG5 221 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 GPHB5Q86YW7 130 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 KLHL30-AS1Q8NEE0 82 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 OR51G1Q8NGK1 321 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 ZNF747Q9BV97 191 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 GNB4Q9HAV0 340 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 PFDN2Q9UHV9 154 aa12.36□□□□□ -0.43
PRPF40A-212ENST00000545856 UMAD1C9J7I0 102 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 TSPAN15O95858 294 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 IGHV3-11P01762 117 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 RD3LP0DJH9 198 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 SPP1P10451 314 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 ATP6V0CP27449 155 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 ADMP35318 185 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 ZNF616Q08AN1 781 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 KHDC1LQ5JSQ8 128 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 LCNL1Q6ZST4 164 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 ST8SIA2Q92186 375 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 PFDN5Q99471 154 aa12.35□□□□□ -0.43
PRPF40A-212ENST00000545856 RNF2Q99496 336 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms