RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, human

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-208	ENST00000543525	TMEM133	Q9H2Q1	129 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	APC2	O95996	2303 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525		A0A1W2PPI3	338 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	IZUMO1R	A6ND01	250 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	SHISA9	B4DS77	424 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525		E7EQL1	145 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	HLA-DQA1	P01909	254 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	FRMD6-AS1	P0C7T7	363 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	PYY	P10082	97 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	LINC00310	P59036	64 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	OR10J3	Q5JRS4	329 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525		Q8NA96	180 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	STXBP6	Q8NFX7	210 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	C22orf15	Q8WYQ4	148 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	TNFRSF14	Q92956	283 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	PERP	Q96FX8	193 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	TBX15	Q96SF7	602 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	SAMD10	Q9BYL1	202 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	PRORY	Q9H606	182 aa		10.86	□□□□□ -0.67
PPME1-208	ENST00000543525	TENM4	Q6N022	2769 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	IGHV1-69-2	A0A0G2JMI3	117 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	KIR2DL5B	A0A0G2JN68	375 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	KIR2DL5B	A0A0G2JPC4	375 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	PEX7	O00628	323 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	SPINK4	O60575	86 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	PRRX1	P54821	245 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	TCL1A	P56279	114 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	SST	P61278	116 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	USF2	Q15853	346 aa	Predicted RBP	10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	FAM231D	Q6ZW35	169 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	KIR2DL5A	Q8N109	375 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	HSPB9	Q9BQS6	159 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	CHRDL1	Q9BU40	450 aa		10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	PRRC2C	Q9Y520	2896 aa	Known RBP	10.85	□□□□□ -0.67
PPME1-208	ENST00000543525	NAV2	Q8IVL1	2488 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	ICE1	Q9Y2F5	2266 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	APOBEC3A	P31941	199 aa	Predicted RBP	10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	BRS3	P32247	399 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	RPL27A	P46776	148 aa	Known RBP	10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	RBPJ	Q06330	500 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	PVRIG	Q6DKI7	326 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525		Q6ZWC4	215 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	FXYD5	Q96DB9	178 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	GRAMD2B	Q96HH9	432 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	TRGV9	Q99603	122 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	GNB4	Q9HAV0	340 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	TPSG1	Q9NRR2	321 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	TNFRSF19	Q9NS68	423 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	PLCE1	Q9P212	2302 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	ACACA	Q13085	2346 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	TNC	P24821	2201 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525		B9A039	149 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	IGHV3-48	P01763	117 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	REG1A	P05451	166 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	CRYGC	P07315	174 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	SNRPC	P09234	159 aa	Known RBP	10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	MRGPRG-AS1	Q2M3A8	158 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	RASL11A	Q6T310	242 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	LINC00305	Q7Z4B0	112 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	SIGLECL1	Q8N7X8	197 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	MISP3	Q96FF7	219 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	RITA1	Q96K30	269 aa		10.84	□□□□□ -0.67
PPME1-208	ENST00000543525	IGLC7	A0M8Q6	106 aa		10.83	□□□□□ -0.68
PPME1-208	ENST00000543525	FSTL3	O95633	263 aa		10.83	□□□□□ -0.68
PPME1-208	ENST00000543525	TNXA	Q16473	311 aa		10.83	□□□□□ -0.68
PPME1-208	ENST00000543525	MRPL54	Q6P161	138 aa	Known RBP	10.83	□□□□□ -0.68
PPME1-208	ENST00000543525	TOMM20L	Q6UXN7	152 aa		10.83	□□□□□ -0.68
PPME1-208	ENST00000543525	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.83	□□□□□ -0.68
PPME1-208	ENST00000543525	MRPL36	Q9P0J6	103 aa	Known RBP	10.83	□□□□□ -0.68
PPME1-208	ENST00000543525	IGHV3-72	A0A0B4J1Y9	119 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525		F2Z2F3	143 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	CORT	O00230	105 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	APCS	P02743	223 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	CD3E	P07766	207 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	SLC35B1	P78383	322 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	HCP5	Q6MZN7	132 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	C11orf42	Q8N5U0	333 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	NHLRC2	Q8NBF2	726 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	OR1B1	Q8NGR6	318 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	LINC00479	Q96M42	142 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	KALRN	O60229	2985 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	CRYGB	P07316	175 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	ORM2	P19652	201 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	CASP6	P55212	293 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	UBE2G1	P62253	170 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	TBR1	Q16650	682 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	TMEM183B	Q1AE95	376 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	TEX43	Q6ZNM6	134 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	WIPF2	Q8TF74	440 aa	Predicted RBP	10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	MBD6	Q96DN6	1003 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	ZNF586	Q9NXT0	402 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	EPDR1	Q9UM22	224 aa		10.82	□□□□□ -0.68
PPME1-208	ENST00000543525	IGHV2-26	A0A0B4J1V2	119 aa		10.81	□□□□□ -0.68
PPME1-208	ENST00000543525	TRAV34	A0A0B4J273	112 aa		10.81	□□□□□ -0.68
PPME1-208	ENST00000543525	C22orf46	C9J442	243 aa		10.81	□□□□□ -0.68
PPME1-208	ENST00000543525	HYPM	O75409	117 aa		10.81	□□□□□ -0.68
PPME1-208	ENST00000543525	MOS	P00540	346 aa		10.81	□□□□□ -0.68
PPME1-208	ENST00000543525	SLC25A5	P05141	298 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 80 ms