RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 MGST2Q99735 147 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 LRRK2Q5S007 2527 aa7.43□□□□□ -1.22
GNE-206ENST00000543356 FCN1O00602 326 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 HBE1P02100 147 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 PTTG1IPP53801 180 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 ELLP55199 621 aaPredicted RBP7.42□□□□□ -1.22
GNE-206ENST00000543356 RNF151Q2KHN1 245 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 FFAR4Q5NUL3 377 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 Q5PR19 223 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 SPSB3Q6PJ21 355 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 TEPPQ6URK8 271 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 GGTLC1Q9BX51 225 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 C7orf69Q9H7B7 122 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 VSIRQ9H7M9 311 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 HIF1ANQ9NWT6 349 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 C1RLQ9NZP8 487 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 TENM4Q6N022 2769 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 ELOA3CA0A087WX78 387 aaPredicted RBP7.42□□□□□ -1.22
GNE-206ENST00000543356 J3QLI3 93 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 RUSC1-AS1Q66K80 236 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 TMEM144Q7Z5S9 345 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 MBD3L1Q8WWY6 194 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 TXN2Q99757 166 aa7.42□□□□□ -1.22
GNE-206ENST00000543356 CORTO00230 105 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 TGOLN2O43493 480 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 AREGP15514 252 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 RAB31Q13636 194 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 ZNF726P1Q15940 193 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 FAM120AOSQ5T036 256 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 OR1P1Q8NH06 330 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 RCC1LQ96I51 464 aaKnown RBP7.41□□□□□ -1.22
GNE-206ENST00000543356 SLC35E1Q96K37 410 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 MEGF9Q9H1U4 602 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 RNF24Q9Y225 148 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 F11RQ9Y624 299 aaKnown RBP7.41□□□□□ -1.22
GNE-206ENST00000543356 CBY3A6NI87 242 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 CNIH1O95406 144 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 REG1AP05451 166 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 ACOT6Q3I5F7 207 aaPredicted RBP7.41□□□□□ -1.22
GNE-206ENST00000543356 TEX38Q6PEX7 206 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 ZNF562Q6V9R5 426 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 KRTAP1-3Q8IUG1 177 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 SSMEM1Q8WWF3 244 aa7.41□□□□□ -1.22
GNE-206ENST00000543356 ZNF705GA8MUZ8 300 aaPredicted RBP7.4□□□□□ -1.22
GNE-206ENST00000543356 CXCL1P09341 107 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 IGHV4-38-2P0DP08 117 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 RPL29P47914 159 aaKnown RBP7.4□□□□□ -1.22
GNE-206ENST00000543356 FXYD3Q14802 87 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 SLC35E3Q7Z769 313 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 RPP25LQ8N5L8 163 aaKnown RBP7.4□□□□□ -1.22
GNE-206ENST00000543356 Q8N9W7 124 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 OR10G4Q8NGN3 311 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 OR10G9Q8NGN4 311 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 OR10G7Q8NGN6 311 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 PBDC1Q9BVG4 233 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 ELOVL1Q9BW60 279 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 SCRT1Q9BWW7 348 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 PXMP4Q9Y6I8 212 aa7.4□□□□□ -1.22
GNE-206ENST00000543356 SPTAN1Q13813 2472 aaKnown RBP7.4□□□□□ -1.22
GNE-206ENST00000543356 IGHV3OR16-10A0A075B7F0 116 aa7.4□□□□□ -1.23
GNE-206ENST00000543356 CTXND1A0A1B0GTU2 59 aa7.4□□□□□ -1.23
GNE-206ENST00000543356 NCBP2LA6PVI3 153 aaKnown RBP7.4□□□□□ -1.23
GNE-206ENST00000543356 RNF223E7ERA6 249 aa7.4□□□□□ -1.23
GNE-206ENST00000543356 HLA-DRB1P01911 266 aa7.4□□□□□ -1.23
GNE-206ENST00000543356 MFAP2P55001 183 aa7.4□□□□□ -1.23
GNE-206ENST00000543356 ZNF343Q6P1L6 599 aa7.4□□□□□ -1.23
GNE-206ENST00000543356 BRD3OSQ6XYD6 125 aa7.4□□□□□ -1.23
GNE-206ENST00000543356 SSX7Q7RTT5 188 aa7.4□□□□□ -1.23
GNE-206ENST00000543356 OR1L6Q8NGR2 347 aa7.4□□□□□ -1.23
GNE-206ENST00000543356 ARPC1AQ92747 370 aa7.4□□□□□ -1.23
GNE-206ENST00000543356 ACTR3CQ9C0K3 210 aaPredicted RBP7.4□□□□□ -1.23
GNE-206ENST00000543356 AKAP6Q13023 2319 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 A0A0U1RQK1 487 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 MAP1LC3B2A6NCE7 125 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 CCL25O15444 150 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 OR2C1O95371 312 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 CRYGCP07315 174 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 IGHV4-31P0DP07 118 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 PRR20EP86478 221 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 PRR20CP86479 221 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 PRR20DP86480 221 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 PRR20BP86481 221 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 PRR20AP86496 221 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 OR5I1Q13606 314 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 GUK1Q16774 197 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 KLF17Q5JT82 389 aaPredicted RBP7.39□□□□□ -1.23
GNE-206ENST00000543356 LEMD1Q68G75 181 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 ABHD5Q8WTS1 349 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 MAP1LC3BQ9GZQ8 125 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 SMDT1Q9H4I9 107 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 FNDC4Q9H6D8 234 aaPredicted RBP7.39□□□□□ -1.23
GNE-206ENST00000543356 SLC45A2Q9UMX9 530 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 TACC2O95359 2948 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 TNCP24821 2201 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 NPIPB5A8MRT5 1133 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 CYB5BO43169 146 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 TRGC2P03986 189 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 TFPI2P48307 235 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 CX3CL1P78423 397 aa7.39□□□□□ -1.23
GNE-206ENST00000543356 CCL20P78556 96 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms