RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 GOSR1O95249 250 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 TFPI2P48307 235 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 MFAP4P55083 255 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 TCTAP57738 103 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 ARF6P62330 175 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 TWIST1Q15672 202 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 C10orf55Q5SWW7 151 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 CRIP3Q6Q6R5 217 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 PET117Q6UWS5 81 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 TMEM136Q6ZRR5 245 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 TMEM116Q8NCL8 245 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 SOX21Q9Y651 276 aaPredicted RBP6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 OR2T8A6NH00 312 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 F2RL2O00254 374 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 GPX1P07203 203 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 NMUP48645 174 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 TMEM97Q5BJF2 176 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 Q9H3A6 140 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 TRAV30A0A087WSZ9 112 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 PCP4P48539 62 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 RPL24P83731 157 aaKnown RBP6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 ST6GALNAC3Q8NDV1 305 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 NUDT10Q8NFP7 164 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 TSKUQ8WUA8 353 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 NUDT11Q96G61 164 aa6.74□□□□□ -1.33
PRKAB1-207ENST00000542698 TRAV9-2A0A087WT02 112 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 GAGE10A6NGK3 116 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 IGHG3P01860 377 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 RPL7P18124 248 aaKnown RBP6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 BSPH1Q075Z2 132 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 Q6ZR03 302 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 PNKDQ8N490 385 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 FMC1Q96HJ9 113 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 LOC102724200A0A096LPH7 203 aaPredicted RBP6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 IGKV1-16P04430 117 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 SMIM17P0DL12 118 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 VDAC2P45880 294 aaPredicted RBP6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 ZNF114Q8NC26 417 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 ST6GALNAC6Q969X2 333 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 PYGO2Q9BRQ0 406 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 MUC22E2RYF6 1773 aaPredicted RBP6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 EML6Q6ZMW3 1958 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 TMEM131Q92545 1883 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 UQCRFS1P47985 274 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 FNDC10F2Z333 226 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 EREGO14944 169 aa6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 YPEL3P61236 119 aaPredicted RBP6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 POLR3KQ9Y2Y1 108 aaPredicted RBP6.73□□□□□ -1.33
PRKAB1-207ENST00000542698 ZFHX2Q9C0A1 2572 aaPredicted RBP6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 CDH23Q9H251 3354 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 DLEU1O43261 78 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 APOHP02749 345 aaPredicted RBP6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 LINC00614P0C842 121 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 C3orf79P0CE67 100 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 COA6Q5JTJ3 125 aaKnown RBP6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 PPP1R27Q86WC6 154 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 NIT1Q86X76 327 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 MUC15Q8N387 334 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 MYOZ3Q8TDC0 251 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 SCRT1Q9BWW7 348 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 SNHG12Q9BXW3 62 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 TMEM14BQ9NUH8 114 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 ARFGEF3Q5TH69 2177 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 A6NNC1 897 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 B9A039 149 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 ITGB1BP1O14713 200 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 WNT2P09544 360 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 APOBEC3AP31941 199 aaPredicted RBP6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 Q0VG73 95 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 ECSCRQ19T08 205 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 SPANXN1Q5VSR9 72 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 FAM57AQ8TBR7 257 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 LINC00479Q96M42 142 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 C11orf1Q9H5F2 150 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 CLEC5AQ9NY25 188 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 IGHV3-35A0A0C4DH35 117 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 CCL21O00585 134 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 CDX4O14627 284 aaPredicted RBP6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 SAPCD1Q5SSQ6 148 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 LCN12Q6JVE5 192 aa6.72□□□□□ -1.33
PRKAB1-207ENST00000542698 C15orf65H3BRN8 121 aa6.71□□□□□ -1.33
PRKAB1-207ENST00000542698 RNASE2P10153 161 aaKnown RBP6.71□□□□□ -1.33
PRKAB1-207ENST00000542698 RELQ04864 619 aaPredicted RBP6.71□□□□□ -1.33
PRKAB1-207ENST00000542698 RASL11AQ6T310 242 aa6.71□□□□□ -1.33
PRKAB1-207ENST00000542698 SLC25A48Q6ZT89 311 aaKnown RBP6.71□□□□□ -1.33
PRKAB1-207ENST00000542698 TEX45Q8NA69 505 aa6.71□□□□□ -1.33
PRKAB1-207ENST00000542698 DPM3Q9P2X0 92 aa6.71□□□□□ -1.33
PRKAB1-207ENST00000542698 EML5Q05BV3 1969 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 RPS20P60866 119 aaKnown RBP6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 ZNF788Q6ZQV5 615 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 ATP5L2Q7Z4Y8 100 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 TMEM167AQ8TBQ9 72 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 TMEM133Q9H2Q1 129 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 S4R3C0 116 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 J3KRW8 73 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 ZNF134P52741 427 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 PSG9Q00887 426 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 TMEM249Q2WGJ8 235 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 TMEM200BQ69YZ2 307 aa6.71□□□□□ -1.34
PRKAB1-207ENST00000542698 Q6ZPA2 131 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms