RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 LGALS7P47929 136 aa13.21□□□□□ -0.29
VARS2-212ENST00000542001 PPOXP50336 477 aa13.21□□□□□ -0.29
VARS2-212ENST00000542001 ERVK11-1P61568 191 aa13.21□□□□□ -0.29
VARS2-212ENST00000542001 A0A0G2JNJ9 132 aa13.21□□□□□ -0.3
VARS2-212ENST00000542001 STAG3L2P0CL84 134 aa13.21□□□□□ -0.3
VARS2-212ENST00000542001 STAG3L3P0CL85 134 aa13.21□□□□□ -0.3
VARS2-212ENST00000542001 DIAPH2-AS1Q14236 149 aa13.21□□□□□ -0.3
VARS2-212ENST00000542001 LY6EQ16553 131 aa13.21□□□□□ -0.3
VARS2-212ENST00000542001 OR52E5Q8NH55 327 aa13.21□□□□□ -0.3
VARS2-212ENST00000542001 Q9UFV3 132 aa13.21□□□□□ -0.3
VARS2-212ENST00000542001 ISLRO14498 428 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 TNFSF13O75888 250 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 PRSS1P07477 247 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 FOLR2P14207 255 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 TFPI2P48307 235 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 PMCHL1Q16048 86 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 LURAP1LQ8IV03 231 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 STXBP6Q8NFX7 210 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 TRAV1-1A0A0B4J248 108 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 SRSF7Q16629 238 aaKnown RBP eCLIP13.2□□□□□ -0.3
VARS2-212ENST00000542001 ARHGAP32A7KAX9 2087 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 TRBV24-1A0A075B6N3 115 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 WNT2P09544 360 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 TAS2R60P59551 318 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 CD69Q07108 199 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 COTL1Q14019 142 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 OR4A5Q8NH83 315 aa13.2□□□□□ -0.3
VARS2-212ENST00000542001 HIGD1CA8MV81 97 aa13.19□□□□□ -0.3
VARS2-212ENST00000542001 PEX7O00628 323 aa13.19□□□□□ -0.3
VARS2-212ENST00000542001 BPIFA4PQ86YQ2 179 aa13.19□□□□□ -0.3
VARS2-212ENST00000542001 TXNDC17Q9BRA2 123 aa13.19□□□□□ -0.3
VARS2-212ENST00000542001 HIVEP3Q5T1R4 2406 aa13.19□□□□□ -0.3
VARS2-212ENST00000542001 APOBEC3AP31941 199 aaPredicted RBP13.19□□□□□ -0.3
VARS2-212ENST00000542001 UNQ5815/PRO19632Q6UWF5 114 aa13.19□□□□□ -0.3
VARS2-212ENST00000542001 TMEM170AQ8WVE7 144 aa13.19□□□□□ -0.3
VARS2-212ENST00000542001 HLA-DQA1P01909 254 aa13.19□□□□□ -0.3
VARS2-212ENST00000542001 KLRD1Q13241 179 aa13.19□□□□□ -0.3
VARS2-212ENST00000542001 DMRTA1Q5VZB9 504 aa13.19□□□□□ -0.3
VARS2-212ENST00000542001 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.18□□□□□ -0.3
VARS2-212ENST00000542001 IGHG3P01860 377 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 LY6DQ14210 128 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 PRSS8Q16651 343 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 C10orf91Q5T1B1 145 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 OR4C5Q8NGB2 326 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 RAXQ9Y2V3 346 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 PRCDQ00LT1 54 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 KCNS1Q96KK3 526 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 DIRC2Q96SL1 478 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 AREGP15514 252 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 MBNL2Q5VZF2 373 aaKnown RBP13.18□□□□□ -0.3
VARS2-212ENST00000542001 GAFA1Q96PS6 74 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 MCRIP2Q9BUT9 160 aaKnown RBP13.18□□□□□ -0.3
VARS2-212ENST00000542001 M0QZ24 198 aa13.18□□□□□ -0.3
VARS2-212ENST00000542001 RPLP1P05386 114 aaKnown RBP13.18□□□□□ -0.3
VARS2-212ENST00000542001 UQCRFS1P47985 274 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 ADIPOQQ15848 244 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 ZNF788Q6ZQV5 615 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 SPACA3Q8IXA5 215 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 C11orf53Q8IXP5 236 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 SH2D7A6NKC9 451 aaPredicted RBP13.17□□□□□ -0.3
VARS2-212ENST00000542001 F5H697 171 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 COL8A2P25067 703 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 EXOC3-AS1Q8N2X6 119 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 LOC105371242A0A075B767 164 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.17□□□□□ -0.3
VARS2-212ENST00000542001 LCN12Q6JVE5 192 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 NAV2Q8IVL1 2488 aa13.17□□□□□ -0.3
VARS2-212ENST00000542001 TWIST1Q15672 202 aa13.16□□□□□ -0.3
VARS2-212ENST00000542001 TIMM23O14925 209 aa13.16□□□□□ -0.3
VARS2-212ENST00000542001 SIAH2O43255 324 aa13.16□□□□□ -0.3
VARS2-212ENST00000542001 LEPROTL1O95214 131 aa13.16□□□□□ -0.3
VARS2-212ENST00000542001 LIPFP07098 398 aa13.16□□□□□ -0.3
VARS2-212ENST00000542001 PPIFP30405 207 aaKnown RBP13.16□□□□□ -0.3
VARS2-212ENST00000542001 UTF1Q5T230 341 aa13.16□□□□□ -0.3
VARS2-212ENST00000542001 CNTFRP26992 372 aa13.16□□□□□ -0.3
VARS2-212ENST00000542001 IGFL4Q6B9Z1 124 aa13.16□□□□□ -0.3
VARS2-212ENST00000542001 PPP1R27Q86WC6 154 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 BET1LQ9NYM9 111 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 B9A039 149 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 MT-ND6P03923 174 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 TBR1Q16650 682 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 RABAC1Q9UI14 185 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 NACAE9PAV3 2078 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 A6NNC1 897 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 SRRM4A7MD48 611 aaKnown RBP13.15□□□□□ -0.3
VARS2-212ENST00000542001 TM4SF5O14894 197 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 S100A7P31151 101 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 RIGQ13278 110 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 TMEM133Q9H2Q1 129 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 KLK15Q9H2R5 256 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 NRN1Q9NPD7 142 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 TPSG1Q9NRR2 321 aa13.15□□□□□ -0.3
VARS2-212ENST00000542001 JOSD1Q15040 202 aaPredicted RBP13.14□□□□□ -0.31
VARS2-212ENST00000542001 C18orf15Q96N68 181 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 TMEM191AQ9H0A3 160 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 Q9H3A6 140 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 FAM215AQ9Y5M1 114 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 FBLL1A6NHQ2 334 aaKnown RBP13.14□□□□□ -0.31
VARS2-212ENST00000542001 ZCCHC14Q8WYQ9 949 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms