RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 LGALS4P56470 323 aa14.31□□□□□ -0.12
GNE-204ENST00000539208 OR5I1Q13606 314 aa14.31□□□□□ -0.12
GNE-204ENST00000539208 RPEL1Q2QD12 228 aa14.31□□□□□ -0.12
GNE-204ENST00000539208 LINC00305Q7Z4B0 112 aa14.31□□□□□ -0.12
GNE-204ENST00000539208 FXYD5Q96DB9 178 aa14.31□□□□□ -0.12
GNE-204ENST00000539208 FBXL15Q9H469 300 aa14.31□□□□□ -0.12
GNE-204ENST00000539208 DPM3Q9P2X0 92 aa14.31□□□□□ -0.12
GNE-204ENST00000539208 CDC42EP3Q9UKI2 254 aa14.31□□□□□ -0.12
GNE-204ENST00000539208 NAV3Q8IVL0 2385 aa14.31□□□□□ -0.12
GNE-204ENST00000539208 ISLRO14498 428 aa14.3□□□□□ -0.12
GNE-204ENST00000539208 LY6HO94772 140 aa14.3□□□□□ -0.12
GNE-204ENST00000539208 AMBPP02760 352 aa14.3□□□□□ -0.12
GNE-204ENST00000539208 PYYP10082 97 aa14.3□□□□□ -0.12
GNE-204ENST00000539208 PLP1P60201 277 aa14.3□□□□□ -0.12
GNE-204ENST00000539208 RUSC1-AS1Q66K80 236 aa14.3□□□□□ -0.12
GNE-204ENST00000539208 DTX2Q86UW9 622 aa14.3□□□□□ -0.12
GNE-204ENST00000539208 SRSF12Q8WXF0 261 aaKnown RBP14.3□□□□□ -0.12
GNE-204ENST00000539208 LINC00587B1AMM8 73 aa14.3□□□□□ -0.12
GNE-204ENST00000539208 LDLRAD2Q5SZI1 272 aa14.3□□□□□ -0.12
GNE-204ENST00000539208 ZNF329Q86UD4 541 aa14.3□□□□□ -0.12
GNE-204ENST00000539208 LOC105371242A0A075B767 164 aa14.29□□□□□ -0.12
GNE-204ENST00000539208 TIMM23O14925 209 aa14.29□□□□□ -0.12
GNE-204ENST00000539208 HIST1H1BP16401 226 aaKnown RBP14.29□□□□□ -0.12
GNE-204ENST00000539208 CEACAM3P40198 252 aa14.29□□□□□ -0.12
GNE-204ENST00000539208 SSBP3Q9BWW4 388 aaPredicted RBP14.29□□□□□ -0.12
GNE-204ENST00000539208 MOSP00540 346 aa14.29□□□□□ -0.12
GNE-204ENST00000539208 PRTN3P24158 256 aa14.29□□□□□ -0.12
GNE-204ENST00000539208 MYCNOSP40205 109 aa14.29□□□□□ -0.12
GNE-204ENST00000539208 ARF6P62330 175 aa14.29□□□□□ -0.12
GNE-204ENST00000539208 ODF3BA8MYP8 253 aa14.28□□□□□ -0.12
GNE-204ENST00000539208 FCN1O00602 326 aa14.28□□□□□ -0.12
GNE-204ENST00000539208 HYPMO75409 117 aa14.28□□□□□ -0.12
GNE-204ENST00000539208 C19orf35Q6ZS72 473 aa14.28□□□□□ -0.12
GNE-204ENST00000539208 C1orf122Q6ZSJ8 110 aa14.28□□□□□ -0.12
GNE-204ENST00000539208 CFHR4Q92496 578 aa14.28□□□□□ -0.12
GNE-204ENST00000539208 IGF2RP11717 2491 aa14.28□□□□□ -0.12
GNE-204ENST00000539208 SFTPCP11686 197 aa14.27□□□□□ -0.12
GNE-204ENST00000539208 ORM2P19652 201 aa14.27□□□□□ -0.12
GNE-204ENST00000539208 NPBQ8NG41 125 aa14.27□□□□□ -0.12
GNE-204ENST00000539208 OR1B1Q8NGR6 318 aa14.27□□□□□ -0.12
GNE-204ENST00000539208 TRBV9A0A0B4J1U6 114 aa14.27□□□□□ -0.13
GNE-204ENST00000539208 APELAP0DMC3 54 aa14.27□□□□□ -0.13
GNE-204ENST00000539208 RPL19P84098 196 aaKnown RBP14.27□□□□□ -0.13
GNE-204ENST00000539208 JOSD1Q15040 202 aaPredicted RBP14.27□□□□□ -0.13
GNE-204ENST00000539208 PLGLAQ15195 96 aa14.27□□□□□ -0.13
GNE-204ENST00000539208 CDPF1Q6NVV7 123 aa14.27□□□□□ -0.13
GNE-204ENST00000539208 OR5R1Q8NH85 324 aa14.27□□□□□ -0.13
GNE-204ENST00000539208 SPTA1P02549 2419 aa14.27□□□□□ -0.13
GNE-204ENST00000539208 I3L2K1 104 aa14.26□□□□□ -0.13
GNE-204ENST00000539208 PEX7O00628 323 aa14.26□□□□□ -0.13
GNE-204ENST00000539208 RNASE7Q9H1E1 156 aaKnown RBP14.26□□□□□ -0.13
GNE-204ENST00000539208 PLXNB1O43157 2135 aa14.26□□□□□ -0.13
GNE-204ENST00000539208 NBR2O15453 112 aa14.26□□□□□ -0.13
GNE-204ENST00000539208 NDUFA3O95167 84 aa14.26□□□□□ -0.13
GNE-204ENST00000539208 ADMP35318 185 aa14.26□□□□□ -0.13
GNE-204ENST00000539208 CX3CL1P78423 397 aa14.26□□□□□ -0.13
GNE-204ENST00000539208 TMEM18Q96B42 140 aa14.26□□□□□ -0.13
GNE-204ENST00000539208 PRDM13Q9H4Q3 707 aa14.26□□□□□ -0.13
GNE-204ENST00000539208 IGLC1P0CG04 106 aa14.25□□□□□ -0.13
GNE-204ENST00000539208 MMDQ15546 238 aa14.25□□□□□ -0.13
GNE-204ENST00000539208 IBA57Q5T440 356 aaKnown RBP14.25□□□□□ -0.13
GNE-204ENST00000539208 GBGT1Q8N5D6 347 aa14.25□□□□□ -0.13
GNE-204ENST00000539208 KIR3DL3Q8N743 410 aa14.25□□□□□ -0.13
GNE-204ENST00000539208 OR1L6Q8NGR2 347 aa14.25□□□□□ -0.13
GNE-204ENST00000539208 GNB1LQ9BYB4 327 aa14.25□□□□□ -0.13
GNE-204ENST00000539208 WNT10AQ9GZT5 417 aa14.25□□□□□ -0.13
GNE-204ENST00000539208 COX19Q49B96 90 aa14.24□□□□□ -0.13
GNE-204ENST00000539208 FAM231DQ6ZW35 169 aa14.24□□□□□ -0.13
GNE-204ENST00000539208 OR8I2Q8N0Y5 310 aa14.24□□□□□ -0.13
GNE-204ENST00000539208 SMIM27A0A1W2PRY6 76 aa14.24□□□□□ -0.13
GNE-204ENST00000539208 CNIH1O95406 144 aa14.24□□□□□ -0.13
GNE-204ENST00000539208 CBLN1P23435 193 aa14.24□□□□□ -0.13
GNE-204ENST00000539208 GPR6P46095 362 aaPredicted RBP14.24□□□□□ -0.13
GNE-204ENST00000539208 LINC00479Q96M42 142 aa14.24□□□□□ -0.13
GNE-204ENST00000539208 HILPDAQ9Y5L2 63 aa14.24□□□□□ -0.13
GNE-204ENST00000539208 IGHV3-21A0A0B4J1V1 117 aa14.23□□□□□ -0.13
GNE-204ENST00000539208 NBEAP1P0C6P0 100 aa14.23□□□□□ -0.13
GNE-204ENST00000539208 MGST1P10620 155 aaKnown RBP14.23□□□□□ -0.13
GNE-204ENST00000539208 GP9P14770 177 aa14.23□□□□□ -0.13
GNE-204ENST00000539208 MRPL18Q9H0U6 180 aaKnown RBP14.23□□□□□ -0.13
GNE-204ENST00000539208 EPDR1Q9UM22 224 aa14.23□□□□□ -0.13
GNE-204ENST00000539208 KLF12Q9Y4X4 402 aa14.23□□□□□ -0.13
GNE-204ENST00000539208 TMEM183BQ1AE95 376 aa14.23□□□□□ -0.13
GNE-204ENST00000539208 SMIM12Q96EX1 92 aa14.23□□□□□ -0.13
GNE-204ENST00000539208 PRORYQ9H606 182 aa14.23□□□□□ -0.13
GNE-204ENST00000539208 HIGD1AQ9Y241 93 aa14.23□□□□□ -0.13
GNE-204ENST00000539208 OOSP1A8MZH6 123 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 MT-ND6P03923 174 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 GZMBP10144 247 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 PSG1P11464 419 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 RANP62826 216 aaKnown RBP14.22□□□□□ -0.13
GNE-204ENST00000539208 KLRD1Q13241 179 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 WDR73Q6P4I2 378 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 LHFPL4Q7Z7J7 247 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 BAGE2Q86Y30 109 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 ABCA4P78363 2273 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 IER3P46695 156 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 FXYD3Q14802 87 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 CCDC144NLQ6NUI1 221 aa14.22□□□□□ -0.13
GNE-204ENST00000539208 TMEM14CQ9P0S9 112 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms