RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 GNB1LQ9BYB4 327 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 IGKV1D-43A0A0B4J1Z2 117 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 IQCF6A8MYZ5 107 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 TIAF1O95411 115 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 MYOD1P15172 320 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 SLC25A2Q9BXI2 301 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 J3KT08 172 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 K7EP13 123 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 GZMBP10144 247 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 TMEM167AQ8TBQ9 72 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 OSTCQ9NRP0 149 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 SEC16AO15027 2179 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 FAM231BA6NCW3 169 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 ANKRD29Q8N6D5 301 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 TRBV24-1A0A075B6N3 115 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 A0A1B0GTI1 187 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 NBR2O15453 112 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 GFRA3O60609 400 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 CELA3AP09093 270 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 ORMDL2Q53FV1 153 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 FAM168AQ92567 244 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 JMJD8Q96S16 334 aa8.31□□□□□ -1.08
COL4A6-208ENST00000538570 REPIN1Q9BWE0 567 aaKnown RBP8.31□□□□□ -1.08
COL4A6-208ENST00000538570 IGKCP01834 107 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 PLNP26678 52 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 SVIPQ8NHG7 77 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 TMEM242Q9NWH2 141 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 POLR2AP24928 1970 aaKnown RBP8.3□□□□□ -1.08
COL4A6-208ENST00000538570 SAA2-SAA4A0A096LPE2 208 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 C15orf61A6NNL5 157 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 SAA2P0DJI9 122 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-208ENST00000538570 C2orf82Q6UX34 121 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 GLMPQ8WWB7 406 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 TDRD15B5MCY1 1934 aaKnown RBP8.3□□□□□ -1.08
COL4A6-208ENST00000538570 DOCK5Q9H7D0 1870 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 SPTA1P02549 2419 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 TRBV6-7A0A0A0MS04 114 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 DUSP14O95147 198 aaKnown RBP8.3□□□□□ -1.08
COL4A6-208ENST00000538570 PPBPP02775 128 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 CRYBA4P53673 196 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 OR9G4Q8NGQ1 327 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 CHCHD1Q96BP2 118 aaKnown RBP8.3□□□□□ -1.08
COL4A6-208ENST00000538570 YPEL1O60688 119 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 IGHV3-11P01762 117 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 PSG7Q13046 419 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 DUX4L9Q6RFH8 374 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-208ENST00000538570 YPEL2Q96QA6 119 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 SPXQ9BT56 116 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 TMEM126AQ9H061 195 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 PLXNB2O15031 1838 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 LGALS1P09382 135 aaKnown RBP8.3□□□□□ -1.08
COL4A6-208ENST00000538570 CD28P10747 220 aa8.3□□□□□ -1.08
COL4A6-208ENST00000538570 IGFBP3P17936 291 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-208ENST00000538570 CEACAM8P31997 349 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-208ENST00000538570 BCL6BQ8N143 479 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-208ENST00000538570 RNF125Q96EQ8 232 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 CRIM1Q9NZV1 1036 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 A0A1W2PRX2 142 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 TCRBV4S1A1TA0A5B7 111 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 ZNF688P0C7X2 276 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 IGHV1-2P23083 117 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 LY6G6FQ5SQ64 297 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 TEX38Q6PEX7 206 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 MRPL55Q7Z7F7 128 aaKnown RBP8.29□□□□□ -1.08
COL4A6-208ENST00000538570 PLPPR1Q8TBJ4 325 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 C7orf69Q9H7B7 122 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 PSG8Q9UQ74 426 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 GGTLC3B5MD39 225 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 COLCA1Q6ZS62 124 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 LRRC37AA6NMS7 1700 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 A0A1W2PRE2 83 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 C17orf100A8MU93 164 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 VDAC2P45880 294 aaPredicted RBP8.29□□□□□ -1.08
COL4A6-208ENST00000538570 ERG28Q9UKR5 140 aa8.29□□□□□ -1.08
COL4A6-208ENST00000538570 A0A1W2PR77 199 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 LINC00271P0C7V0 271 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 TRGV11A0A075B6L2 103 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 MRPL23Q16540 153 aaKnown RBP8.28□□□□□ -1.08
COL4A6-208ENST00000538570 ANXA2RQ3ZCQ2 193 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 POLR3KQ9Y2Y1 108 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-208ENST00000538570 TRIP12Q14669 1992 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-208ENST00000538570 F2Z2F3 143 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 CRPP02741 224 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 TMEM86BQ8N661 226 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 SPANXDQ9BXN6 97 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 OTOFQ9HC10 1997 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 TNS1Q9HBL0 1735 aaKnown RBP8.28□□□□□ -1.08
COL4A6-208ENST00000538570 hDV102S1A0JD36 115 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 PYYP10082 97 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 ACTL10Q5JWF8 245 aa8.28□□□□□ -1.08
COL4A6-208ENST00000538570 APC2O95996 2303 aa8.27□□□□□ -1.08
COL4A6-208ENST00000538570 SHANK3Q9BYB0 1731 aa8.27□□□□□ -1.08
COL4A6-208ENST00000538570 TRAV26-1A0A087WT03 109 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 CD33P20138 364 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 CSRP3P50461 194 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 ZNF497Q6ZNH5 498 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 TPRP12270 2363 aaKnown RBP8.27□□□□□ -1.09
COL4A6-208ENST00000538570 TRGV4A0A0C4DH28 118 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 M0R2P5 195 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 CCL3L1P16619 93 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms