RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 C17orf112F2Z3M2 114 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 RPL29P47914 159 aaKnown RBP17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 RIPPLY3P57055 190 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 RHOGP84095 191 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 ZNF726P1Q15940 193 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 SSX7Q7RTT5 188 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 STPG3Q8N7X2 389 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 SAT2Q96F10 170 aaPredicted RBP17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 NPFFR1Q9GZQ6 430 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 ANKRD34BA5PLL1 514 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 RAB5CP51148 216 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 PXDC1Q5TGL8 231 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 Q6ZRG5 221 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 RPP25LQ8N5L8 163 aaKnown RBP17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 KLK15Q9H2R5 256 aa17.1■□□□□ 0.33
PACSIN3-209ENST00000532457 HIST1H1BP16401 226 aaKnown RBP17.09■□□□□ 0.33
PACSIN3-209ENST00000532457 RAB31Q13636 194 aa17.09■□□□□ 0.33
PACSIN3-209ENST00000532457 C10orf99Q6UWK7 81 aa17.09■□□□□ 0.33
PACSIN3-209ENST00000532457 CYP2G1PQ6ZSU1 146 aa17.09■□□□□ 0.33
PACSIN3-209ENST00000532457 ZNF329Q86UD4 541 aa17.09■□□□□ 0.33
PACSIN3-209ENST00000532457 CITED4Q96RK1 184 aa17.09■□□□□ 0.33
PACSIN3-209ENST00000532457 SLC39A9Q9NUM3 307 aa17.09■□□□□ 0.33
PACSIN3-209ENST00000532457 ZFP92A6NM28 416 aa17.08■□□□□ 0.33
PACSIN3-209ENST00000532457 IGLC1P0CG04 106 aa17.08■□□□□ 0.33
PACSIN3-209ENST00000532457 C15orf32Q32M92 178 aa17.08■□□□□ 0.33
PACSIN3-209ENST00000532457 TMEM41BQ5BJD5 291 aa17.08■□□□□ 0.33
PACSIN3-209ENST00000532457 LRRC20Q8TCA0 184 aa17.08■□□□□ 0.33
PACSIN3-209ENST00000532457 THYN1Q9P016 225 aa17.08■□□□□ 0.33
PACSIN3-209ENST00000532457 C2CD3Q4AC94 2353 aa17.08■□□□□ 0.32
PACSIN3-209ENST00000532457 TCRBV4S1A1TA0A5B7 111 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 CYB5BO43169 146 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 CLN5O75503 358 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 IGKV1-17P01599 117 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 IGLV1-40P01703 118 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 B2MP61769 119 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 SRSF2Q01130 221 aaKnown RBP17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 LCNL1Q6ZST4 164 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 Q8N2B8 174 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 NECAP1Q8NC96 275 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 ZNF580Q9UK33 172 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 TSPAN15O95858 294 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 TIGITQ495A1 244 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 OR10G4Q8NGN3 311 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 OR10G9Q8NGN4 311 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 OR10G7Q8NGN6 311 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 TRGV9Q99603 122 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 HRH4Q9H3N8 390 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 C21orf62Q9NYP8 219 aa17.07■□□□□ 0.32
PACSIN3-209ENST00000532457 ATRQ13535 2644 aa17.06■□□□□ 0.32
PACSIN3-209ENST00000532457 MFAP4P55083 255 aa17.06■□□□□ 0.32
PACSIN3-209ENST00000532457 BLOC1S1P78537 153 aa17.06■□□□□ 0.32
PACSIN3-209ENST00000532457 COMMD7Q86VX2 200 aa17.06■□□□□ 0.32
PACSIN3-209ENST00000532457 LYPD6BQ8NI32 183 aa17.06■□□□□ 0.32
PACSIN3-209ENST00000532457 RCC1LQ96I51 464 aaKnown RBP17.06■□□□□ 0.32
PACSIN3-209ENST00000532457 M6PRP20645 277 aa17.05■□□□□ 0.32
PACSIN3-209ENST00000532457 ZNF616Q08AN1 781 aa17.05■□□□□ 0.32
PACSIN3-209ENST00000532457 ZNF502Q8TBZ5 544 aa17.05■□□□□ 0.32
PACSIN3-209ENST00000532457 VN1R17PQ8TDU5 208 aa17.05■□□□□ 0.32
PACSIN3-209ENST00000532457 SERTAD4Q9NUC0 356 aa17.05■□□□□ 0.32
PACSIN3-209ENST00000532457 MED9Q9NWA0 146 aa17.05■□□□□ 0.32
PACSIN3-209ENST00000532457 BRI3O95415 125 aa17.05■□□□□ 0.32
PACSIN3-209ENST00000532457 TRGV3P03979 118 aa17.05■□□□□ 0.32
PACSIN3-209ENST00000532457 CCL20P78556 96 aa17.05■□□□□ 0.32
PACSIN3-209ENST00000532457 SPSB3Q6PJ21 355 aa17.05■□□□□ 0.32
PACSIN3-209ENST00000532457 A0A1B0GV50 99 aa17.04■□□□□ 0.32
PACSIN3-209ENST00000532457 ACOT6Q3I5F7 207 aaPredicted RBP17.04■□□□□ 0.32
PACSIN3-209ENST00000532457 DPPA3Q6W0C5 159 aa17.04■□□□□ 0.32
PACSIN3-209ENST00000532457 Q6ZSV7 163 aa17.04■□□□□ 0.32
PACSIN3-209ENST00000532457 PSMB11A5LHX3 300 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 OR2T8A6NH00 312 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 HMGB3O15347 200 aaKnown RBP17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 TSPAN9O75954 239 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 CTSGP08311 255 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 FAM122CQ6P4D5 195 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 PATE2Q6UY27 113 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 TMEM37Q8WXS4 190 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 TMEM158Q8WZ71 300 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 ZNF414Q96IQ9 312 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 CCDC140Q96MF4 163 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 IGHG4P01861 327 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 MBP02144 154 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 H2AFB1P0C5Y9 115 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 PF4V1P10720 104 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 NPBWR1P48145 328 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 ATP5G2Q06055 141 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 Q56UQ5 140 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 SPATA31B1PQ5VZV4 182 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 SFT2D1Q8WV19 159 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 CHRDL1Q9BU40 450 aa17.03■□□□□ 0.32
PACSIN3-209ENST00000532457 H3BUA1 57 aa17.02■□□□□ 0.31
PACSIN3-209ENST00000532457 NDUFA7O95182 113 aa17.02■□□□□ 0.31
PACSIN3-209ENST00000532457 CLEC3BP05452 202 aa17.02■□□□□ 0.31
PACSIN3-209ENST00000532457 PSG1P11464 419 aa17.02■□□□□ 0.31
PACSIN3-209ENST00000532457 ADMP35318 185 aa17.02■□□□□ 0.31
PACSIN3-209ENST00000532457 RAB9AP51151 201 aa17.02■□□□□ 0.31
PACSIN3-209ENST00000532457 TPPP2P59282 170 aa17.02■□□□□ 0.31
PACSIN3-209ENST00000532457 LCN15Q6UWW0 184 aa17.02■□□□□ 0.31
PACSIN3-209ENST00000532457 MBD3L1Q8WWY6 194 aa17.02■□□□□ 0.31
PACSIN3-209ENST00000532457 SLC25A22Q9H936 323 aa17.02■□□□□ 0.31
PACSIN3-209ENST00000532457 SEPSECSQ9HD40 501 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms