RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 STOML3Q8TAV4 291 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 SRSF12Q8WXF0 261 aaKnown RBP2.47□□□□□ -2.01
CD44-219ENST00000525685 H1FXQ92522 213 aaKnown RBP2.47□□□□□ -2.01
CD44-219ENST00000525685 TMEM203Q969S6 136 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 COQ2Q96H96 371 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 BEX2Q9BXY8 128 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 SRRQ9GZT4 340 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 CHST6Q9GZX3 395 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 IFI27L2Q9H2X8 130 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 ZNF430Q9H8G1 570 aaPredicted RBP2.47□□□□□ -2.01
CD44-219ENST00000525685 EXOSC4Q9NPD3 245 aaKnown RBP2.47□□□□□ -2.01
CD44-219ENST00000525685 OR2S2Q9NQN1 319 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 BIN3Q9NQY0 253 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 SIRT7Q9NRC8 400 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 CCL28Q9NRJ3 127 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 NDUFB11Q9NX14 153 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 CALYQ9NYX4 217 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 CKLFQ9UBR5 152 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 MYO9AB2RTY4 2548 aa2.46□□□□□ -2.01
CD44-219ENST00000525685 SPG11Q96JI7 2443 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 IGLV4-69A0A075B6H9 119 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 IGKV2D-24A0A075B6R9 120 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 A0A1B0GV72 72 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 MDFIC2A0A1B0GVS7 189 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 TRDV1A0A1B0GX56 115 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 C11orf94C9JXX5 98 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 K7EP13 123 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 GEMIN2O14893 280 aaKnown RBP2.46□□□□□ -2.02
CD44-219ENST00000525685 DLEU1O43261 78 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 TNFAIP8O95379 198 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 CSN2P05814 226 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 SCGB1A1P11684 91 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 CEACAM3P40198 252 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 RPL35P42766 123 aaKnown RBP2.46□□□□□ -2.02
CD44-219ENST00000525685 RPL5P46777 297 aaKnown RBP2.46□□□□□ -2.02
CD44-219ENST00000525685 DLX6P56179 175 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 EDDM3BP56851 147 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 RBM11P57052 281 aaKnown RBP2.46□□□□□ -2.02
CD44-219ENST00000525685 OR10A3P58181 314 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 RPL31P62899 125 aaKnown RBP2.46□□□□□ -2.02
CD44-219ENST00000525685 KLRD1Q13241 179 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 GNMTQ14749 295 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 CDK10Q15131 360 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 RSU1Q15404 277 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 GRK1Q15835 563 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 MPV17LQ2QL34 196 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 COX19Q49B96 90 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 SYT6Q5T7P8 510 aaPredicted RBP2.46□□□□□ -2.02
CD44-219ENST00000525685 GLT8D1Q68CQ7 371 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 C22orf42Q6IC83 251 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 OR52W1Q6IF63 320 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 OR10K2Q6IF99 312 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 HCP5Q6MZN7 132 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 CD200R1LQ6Q8B3 271 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 ZNF767PQ75MW2 155 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 VMO1Q7Z5L0 202 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 LYG2Q86SG7 212 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 LINC00596Q86U02 117 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 PDZD9Q8IXQ8 264 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 TEX29Q8N6K0 151 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 CHST4Q8NCG5 386 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 OR4M1Q8NGD0 313 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 OR51D1Q8NGF3 324 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 OR51T1Q8NGJ9 327 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 OR1L4Q8NGR5 311 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 OR2G3Q8NGZ4 309 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 OR4K15Q8NH41 348 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 PLPPR1Q8TBJ4 325 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 FAM104AQ969W3 186 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 C14orf144Q96I85 54 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 S100A13Q99584 98 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 GGACTQ9BVM4 153 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 OR51E2Q9H255 320 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 RHOFQ9HBH0 211 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 HRASLSQ9HDD0 168 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 CYTL1Q9NRR1 136 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 ING4Q9UNL4 249 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 ST3GAL6Q9Y274 331 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 SOX21Q9Y651 276 aaPredicted RBP2.46□□□□□ -2.02
CD44-219ENST00000525685 KPTNQ9Y664 436 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 URGCP-MRPS24S4R325 110 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 F8P00451 2351 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 TEX15Q9BXT5 2789 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 CELSR1Q9NYQ6 3014 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 MALRD1Q5VYJ5 2156 aa2.46□□□□□ -2.02
CD44-219ENST00000525685 ARHGAP32A7KAX9 2087 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 A0A087WXM4 84 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 TRAV1-2A0A0B4J238 106 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 IGHV1-69DA0A0B4J2H0 117 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 CENPVL3A0A0U1RRI6 287 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 A0A1W2PRD5 423 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 A0A1W2PRF3 423 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 A0A1W2PRM7 423 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 hADV38S2A0JD32 116 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 ODAMA1E959 279 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 C17orf98A8MV24 154 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 TMEM14DPA8MWL7 114 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 M0R1W7 72 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 GOSR2O14653 212 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 DEGS1O15121 323 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 216 ms