RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 Q8WTZ3 238 aa9.39□□□□□ -0.91
PTPRK-216ENST00000524481 GNB4Q9HAV0 340 aa9.39□□□□□ -0.91
PTPRK-216ENST00000524481 SLC45A2Q9UMX9 530 aa9.39□□□□□ -0.91
PTPRK-216ENST00000524481 IGLC7A0M8Q6 106 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 OR2J3O76001 311 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 IGHV2-5P01817 119 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 NDUFA6P56556 154 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 Q56UQ5 140 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 BEND2Q8NDZ0 799 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 FRZBQ92765 325 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 RBM14Q96PK6 669 aaKnown RBP9.38□□□□□ -0.91
PTPRK-216ENST00000524481 OR5B12Q96R08 314 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 GGACTQ9BVM4 153 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 LSM4Q9Y4Z0 139 aaKnown RBP9.38□□□□□ -0.91
PTPRK-216ENST00000524481 SORL1Q92673 2214 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 IGHV4-30-2A0A087WSY4 118 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 IGHV3-49A0A0A0MS15 119 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 RPL29P47914 159 aaKnown RBP9.38□□□□□ -0.91
PTPRK-216ENST00000524481 COMPP49747 757 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-216ENST00000524481 PDLIM4P50479 330 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 VWC2Q2TAL6 325 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 TEX45Q8NA69 505 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 ZNF114Q8NC26 417 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 C7orf69Q9H7B7 122 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 SDF2L1Q9HCN8 221 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 MT-ND4LP03901 98 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 FABP1P07148 127 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 STAG3L2P0CL84 134 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 STAG3L3P0CL85 134 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 TIGITQ495A1 244 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 MANBALQ9NQG1 85 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 TECRQ9NZ01 308 aaKnown RBP9.38□□□□□ -0.91
PTPRK-216ENST00000524481 NAT8Q9UHE5 227 aa9.38□□□□□ -0.91
PTPRK-216ENST00000524481 LY86O95711 162 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 TRGC2P03986 189 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 TCL1AP56279 114 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 RPL23P62829 140 aaKnown RBP9.37□□□□□ -0.91
PTPRK-216ENST00000524481 OR2T10Q8NGZ9 312 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 KCNIP2Q9NS61 270 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 A0A087X0M5 115 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 A0A1B0GX30 115 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 CLDN34H7C241 214 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 SLC17A3O00476 420 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 SP5Q6BEB4 398 aaPredicted RBP9.37□□□□□ -0.91
PTPRK-216ENST00000524481 TNFRSF14Q92956 283 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 RASL11BQ9BPW5 248 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 FUT9Q9Y231 359 aa9.37□□□□□ -0.91
PTPRK-216ENST00000524481 GNG7O60262 68 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 LMO4P61968 165 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 CENPVQ7Z7K6 275 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-216ENST00000524481 MRPL41Q8IXM3 137 aaKnown RBP9.36□□□□□ -0.91
PTPRK-216ENST00000524481 IGHV3-66A0A0C4DH42 116 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 F6UZH7 168 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 G3V318 75 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 TAS2R45P59539 299 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 GNG5P63218 68 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 C15orf54Q8N8G6 183 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 SMDT1Q9H4I9 107 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 LINC01548A6NM66 108 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 C8orf88P0DMB2 117 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 PSG1P11464 419 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 HOXB4P17483 251 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-216ENST00000524481 GALR1P47211 349 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 PQLC2Q6ZP29 291 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 LY6G5BQ8NDX9 201 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 FAM210BQ96KR6 192 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 PIMREGQ9BSJ6 248 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 PAXXQ9BUH6 204 aa9.36□□□□□ -0.91
PTPRK-216ENST00000524481 OR2T8A6NH00 312 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 FAM106CPP0CH98 169 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 COX6B1P14854 86 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 S100PP25815 95 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 ERVFC1-1P60608 527 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 PRR20EP86478 221 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 PRR20CP86479 221 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 PRR20DP86480 221 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 PRR20BP86481 221 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 PRR20AP86496 221 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 C5orf64Q2M2E5 130 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 AARDQ4LEZ3 155 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 UNQ5815/PRO19632Q6UWF5 114 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 HELTA6NFD8 242 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 ZNF207O43670 478 aaKnown RBP9.35□□□□□ -0.91
PTPRK-216ENST00000524481 ELOBQ15370 118 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 CCDC144NLQ6NUI1 221 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 OCC1Q8TAD7 63 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 DUX5Q96PT3 197 aa9.35□□□□□ -0.91
PTPRK-216ENST00000524481 PARD6GQ9BYG4 376 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-216ENST00000524481 IGHV2-70DA0A0C4DH43 119 aa9.34□□□□□ -0.91
PTPRK-216ENST00000524481 MDFIC2A0A1B0GVS7 189 aa9.34□□□□□ -0.91
PTPRK-216ENST00000524481 IL4P05112 153 aa9.34□□□□□ -0.91
PTPRK-216ENST00000524481 FCGR2BP31994 310 aaPredicted RBP9.34□□□□□ -0.91
PTPRK-216ENST00000524481 RAB4BP61018 213 aa9.34□□□□□ -0.91
PTPRK-216ENST00000524481 NDPQ00604 133 aa9.34□□□□□ -0.91
PTPRK-216ENST00000524481 FABP9Q0Z7S8 132 aa9.34□□□□□ -0.91
PTPRK-216ENST00000524481 CACNG8Q8WXS5 425 aa9.34□□□□□ -0.91
PTPRK-216ENST00000524481 TBX15Q96SF7 602 aa9.34□□□□□ -0.91
PTPRK-216ENST00000524481 TCRBV4S1A1TA0A5B7 111 aa9.34□□□□□ -0.91
PTPRK-216ENST00000524481 M0R1W7 72 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms