RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 DIMT1Q9UNQ2 313 aaKnown RBP4.36□□□□□ -1.71
VPS13B-211ENST00000522802 AP4S1Q9Y587 144 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 YTHDF2Q9Y5A9 579 aaKnown RBP4.36□□□□□ -1.71
VPS13B-211ENST00000522802 RFNGQ9Y644 331 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 LRP2P98164 4655 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 A0A075B6Q4 140 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 TEX48A0A1B0GUV7 120 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 UPK2O00526 184 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 MFNGO00587 321 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 GYG2O15488 501 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 HRASP01112 189 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 IGLV2-11P01706 119 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 EIF4EP06730 217 aaKnown RBP4.35□□□□□ -1.71
VPS13B-211ENST00000522802 DNAH10OSP0CZ25 163 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 GNB3P16520 340 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 MAPK3P27361 379 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-211ENST00000522802 DCKP27707 260 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 CLDN12P56749 244 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 FXYD7P58549 80 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 DEFB1P60022 68 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 RPL24P83731 157 aaKnown RBP4.35□□□□□ -1.71
VPS13B-211ENST00000522802 SSX7Q7RTT5 188 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 RAB40CQ96S21 281 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 HSD17B10Q99714 261 aaKnown RBP4.35□□□□□ -1.71
VPS13B-211ENST00000522802 Q9H3A6 140 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 ELF5Q9UKW6 265 aaPredicted RBP4.35□□□□□ -1.71
VPS13B-211ENST00000522802 ORC6Q9Y5N6 252 aa4.35□□□□□ -1.71
VPS13B-211ENST00000522802 FAT3Q8TDW7 4589 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 A0A1B0GU03 582 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 H3BMM0 161 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 I3L2K1 104 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 CYB5BO43169 146 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 HLA-DQB1P01920 261 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 CD5P06127 495 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 TRAPPC2P0DI81 140 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 TRAPPC2BP0DI82 140 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 CD37P11049 281 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 FGF9P31371 208 aaPredicted RBP4.34□□□□□ -1.71
VPS13B-211ENST00000522802 P2RY1P47900 373 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 CCL18P55774 89 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 LINC00315P59091 139 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 DAD1P61803 113 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 GNGT1P63211 74 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 MRPS15P82914 257 aaKnown RBP4.34□□□□□ -1.71
VPS13B-211ENST00000522802 GAGE5Q13069 117 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 GAGE6Q13070 117 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 OXA1LQ15070 435 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 DNAL1Q4LDG9 190 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 TTC32Q5I0X7 151 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 NFE4Q86UQ8 179 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 DUSP18Q8NEJ0 188 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 OR56B1Q8NGI3 324 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 OR52I2Q8NH67 350 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 PHYHIPQ92561 330 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 LSM10Q969L4 123 aaKnown RBP4.34□□□□□ -1.71
VPS13B-211ENST00000522802 SLC25A46Q96AG3 418 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 RAB3CQ96E17 227 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 SAT2Q96F10 170 aaPredicted RBP4.34□□□□□ -1.71
VPS13B-211ENST00000522802 GINS3Q9BRX5 216 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 HINT2Q9BX68 163 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 PLGRKTQ9HBL7 147 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 MED4Q9NPJ6 270 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 PTTG2Q9NZH5 202 aa4.34□□□□□ -1.71
VPS13B-211ENST00000522802 PUS1Q9Y606 427 aaKnown RBP eCLIP4.34□□□□□ -1.71
VPS13B-211ENST00000522802 TEX50A0A1B0GTY4 177 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 HELTA6NFD8 242 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 SMIM9A6NGZ8 99 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 SULT1C2O00338 296 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 SLC17A2O00624 439 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 IGKV3-20P01619 116 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 HIST1H1DP16402 221 aaKnown RBP4.33□□□□□ -1.72
VPS13B-211ENST00000522802 MFAP4P55083 255 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 NUTF2P61970 127 aaKnown RBP4.33□□□□□ -1.72
VPS13B-211ENST00000522802 GAGE2BQ13066 116 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 DHRS2Q13268 280 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 UBE2V1Q13404 147 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 RAB11BQ15907 218 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 POU2AF1Q16633 256 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 GAGE2EQ4V326 116 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 ACSM3Q53FZ2 586 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 GDF5OSQ5U4N7 250 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 GAGE2AQ6NT46 116 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 GSG1LQ6UXU4 331 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 Q6ZS49 121 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 SPAG16Q8N0X2 631 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 ZNF709Q8N972 641 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 UHRF2Q96PU4 802 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 DCSTAMPQ9H295 470 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 Q9H8V8 135 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 NDUFA4L2Q9NRX3 87 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 ZNF586Q9NXT0 402 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 GAGE2DQ9UEU5 116 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 NSG2Q9Y328 171 aa4.33□□□□□ -1.72
VPS13B-211ENST00000522802 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 F5H768 121 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 DENRO43583 198 aaKnown RBP4.32□□□□□ -1.72
VPS13B-211ENST00000522802 GNG7O60262 68 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 MT-CO2P00403 227 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 HLA-DRB4P13762 266 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 NQO2P16083 231 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms