RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 UBE2BP63146 152 aa2.62□□□□□ -1.99
SKP1-209ENST00000522552 RHOGP84095 191 aa2.62□□□□□ -1.99
SKP1-209ENST00000522552 Q5W150 140 aa2.62□□□□□ -1.99
SKP1-209ENST00000522552 ZNF322Q6U7Q0 402 aaPredicted RBP2.62□□□□□ -1.99
SKP1-209ENST00000522552 SCIMPQ6UWF3 145 aa2.62□□□□□ -1.99
SKP1-209ENST00000522552 LINC00305Q7Z4B0 112 aa2.62□□□□□ -1.99
SKP1-209ENST00000522552 MSRB3Q8IXL7 192 aa2.62□□□□□ -1.99
SKP1-209ENST00000522552 IFT20Q8IY31 132 aa2.62□□□□□ -1.99
SKP1-209ENST00000522552 C10orf126Q8N4M7 172 aa2.62□□□□□ -1.99
SKP1-209ENST00000522552 BRK1Q8WUW1 75 aa2.62□□□□□ -1.99
SKP1-209ENST00000522552 TCEAL2Q9H3H9 227 aaPredicted RBP2.62□□□□□ -1.99
SKP1-209ENST00000522552 MDFICQ9P1T7 246 aa2.62□□□□□ -1.99
SKP1-209ENST00000522552 OBSL1O75147 1896 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 ANKRD31Q8N7Z5 1873 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 EIF4G3O43432 1585 aaKnown RBP2.61□□□□□ -1.99
SKP1-209ENST00000522552 BAZ1BQ9UIG0 1483 aaKnown RBP2.61□□□□□ -1.99
SKP1-209ENST00000522552 A0A087X0T9 212 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 IGHV1-58A0A0C4DH39 117 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 C17orf51A8MQB3 221 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 SLC22A1O15245 554 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 IGHV1-69P01742 117 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 GPX1P07203 203 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 RNASE4P34096 147 aaKnown RBP2.61□□□□□ -1.99
SKP1-209ENST00000522552 NDUFA6P56556 154 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 FXYD7P58549 80 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 TMEM69Q5SWH9 247 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 ZNF705AQ6ZN79 300 aaPredicted RBP2.61□□□□□ -1.99
SKP1-209ENST00000522552 TRAPPC6BQ86SZ2 158 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 CTAGE3PQ8IX95 158 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 C3orf22Q8N5N4 141 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 TEX29Q8N6K0 151 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 CLDND2Q8NHS1 167 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 ZNF471Q9BX82 626 aaPredicted RBP2.61□□□□□ -1.99
SKP1-209ENST00000522552 TRAPPC1Q9Y5R8 145 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 DISP2A7MBM2 1401 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 SPATA31E1Q6ZUB1 1445 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 PRG4Q92954 1404 aaPredicted RBP2.61□□□□□ -1.99
SKP1-209ENST00000522552 TRAPPC8Q9Y2L5 1435 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 MYO10Q9HD67 2058 aa2.61□□□□□ -1.99
SKP1-209ENST00000522552 MDFIC2A0A1B0GVS7 189 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 IGHV3-7P01780 117 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 S100A8P05109 93 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 DYNLT3P51808 116 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 HIST1H4AP62805 103 aaKnown RBP2.6□□□□□ -1.99
SKP1-209ENST00000522552 HBBP68871 147 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 GFI1BQ5VTD9 330 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 SDIM1Q6ZPB5 146 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 PHF5AQ7RTV0 110 aaKnown RBP2.6□□□□□ -1.99
SKP1-209ENST00000522552 SAXO1Q8IYX7 474 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 C9orf106Q8NAJ2 232 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 MAPK1IP1LQ8NDC0 245 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 OR4S1Q8NGB4 309 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 ZNF418Q8TF45 676 aaPredicted RBP2.6□□□□□ -1.99
SKP1-209ENST00000522552 PDCD10Q9BUL8 212 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 OSTCQ9NRP0 149 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 N4BP2Q86UW6 1770 aaPredicted RBP2.6□□□□□ -1.99
SKP1-209ENST00000522552 THADAQ6YHU6 1953 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 CCDC88AQ3V6T2 1871 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 IGKV3D-20A0A0C4DH25 116 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 H3BMG7 143 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 CORTO00230 105 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 NPFFO15130 113 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 ZNF728P0DKX0 622 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 MPV17P39210 176 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 ARPP19P56211 112 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 KRTAP10-9P60411 292 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 MRPS10P82664 201 aaKnown RBP2.6□□□□□ -1.99
SKP1-209ENST00000522552 AKR1C1Q04828 323 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 GLIPR1L1Q6UWM5 242 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 MIR17HGQ75NE6 70 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 HIST3H2BBQ8N257 126 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 TMEM105Q8N8V8 129 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 OR4E2Q8NGC2 313 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 SMCR5Q8TEV8 140 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 PPP3R2Q96LZ3 170 aa2.6□□□□□ -1.99
SKP1-209ENST00000522552 NAA38Q9BRA0 125 aaKnown RBP2.6□□□□□ -1.99
SKP1-209ENST00000522552 ADAT1Q9BUB4 502 aaKnown RBP2.6□□□□□ -1.99
SKP1-209ENST00000522552 POLEQ07864 2286 aa2.59□□□□□ -1.99
SKP1-209ENST00000522552 COL18A1P39060 1754 aa2.59□□□□□ -1.99
SKP1-209ENST00000522552 ANAPC1Q9H1A4 1944 aa2.59□□□□□ -1.99
SKP1-209ENST00000522552 IGKV1D-37A0A075B6S9 117 aa2.59□□□□□ -2
SKP1-209ENST00000522552 IGKV3D-15A0A087WSY6 115 aa2.59□□□□□ -2
SKP1-209ENST00000522552 TRAV13-1A0A0B4J241 112 aa2.59□□□□□ -2
SKP1-209ENST00000522552 C20orf202A1L168 122 aa2.59□□□□□ -2
SKP1-209ENST00000522552 GGTLC3B5MD39 225 aa2.59□□□□□ -2
SKP1-209ENST00000522552 PANO1I0J062 215 aa2.59□□□□□ -2
SKP1-209ENST00000522552 C19orf84I3L1E1 186 aa2.59□□□□□ -2
SKP1-209ENST00000522552 K7ERJ3 54 aa2.59□□□□□ -2
SKP1-209ENST00000522552 IFNA4P05014 189 aa2.59□□□□□ -2
SKP1-209ENST00000522552 RPL22P35268 128 aaKnown RBP2.59□□□□□ -2
SKP1-209ENST00000522552 ZNF181Q2M3W8 571 aa2.59□□□□□ -2
SKP1-209ENST00000522552 CCSMST1Q4G0I0 132 aa2.59□□□□□ -2
SKP1-209ENST00000522552 C22orf39Q6P5X5 142 aa2.59□□□□□ -2
SKP1-209ENST00000522552 HIST1H2BLQ99880 126 aa2.59□□□□□ -2
SKP1-209ENST00000522552 TAF9BQ9HBM6 251 aa2.59□□□□□ -2
SKP1-209ENST00000522552 MARCOQ9UEW3 520 aaPredicted RBP2.59□□□□□ -2
SKP1-209ENST00000522552 DSPPQ9NZW4 1301 aa2.59□□□□□ -2
SKP1-209ENST00000522552 SCN8AQ9UQD0 1980 aa2.58□□□□□ -2
SKP1-209ENST00000522552 SYNJ1O43426 1573 aa2.58□□□□□ -2
SKP1-209ENST00000522552 NCKAP5O14513 1909 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms