RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 ZNF688P0C7X2 276 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 LAGE3Q14657 143 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 OR10W1Q8NGF6 305 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 GFI1Q99684 422 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 F2Z2F3 143 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 CRPP02741 224 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 MPZP25189 248 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 PTPRZ1P23471 2315 aaPredicted RBP9.45□□□□□ -0.9
LAMA4-219ENST00000522006 IGKV1D-8A0A087WSZ0 117 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 IGKV2-40A0A087WW87 121 aaPredicted RBP9.45□□□□□ -0.9
LAMA4-219ENST00000522006 J3QRE1 110 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 IGKV2D-40P01614 121 aaPredicted RBP9.45□□□□□ -0.9
LAMA4-219ENST00000522006 HIST3H2BBQ8N257 126 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 PAQR4Q8N4S7 273 aaPredicted RBP9.45□□□□□ -0.9
LAMA4-219ENST00000522006 ARID2Q68CP9 1835 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 FBLN5Q9UBX5 448 aa9.45□□□□□ -0.9
LAMA4-219ENST00000522006 IGHV1-18A0A0C4DH31 117 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 LYPD3O95274 346 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 TIMP3P35625 211 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 ID3Q02535 119 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 GAGE13Q4V321 117 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 GTSCR1Q86UQ5 136 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 ATXN8Q156A1 80 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 CSRP2Q16527 193 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 PRR31Q5SQ13 230 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 GGTLC3B5MD39 225 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 MRPL14Q6P1L8 145 aaKnown RBP9.44□□□□□ -0.9
LAMA4-219ENST00000522006 PRSS22Q9GZN4 317 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 CRIM1Q9NZV1 1036 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 TIMM23O14925 209 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 CD33P20138 364 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 LINC00158P58513 81 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 TMEM155Q4W5P6 130 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 SPATA31B1PQ5VZV4 182 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 TDGF1P3P51864 188 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 SEC11AP67812 179 aa9.44□□□□□ -0.9
LAMA4-219ENST00000522006 TDRD6O60522 2096 aaKnown RBP9.44□□□□□ -0.9
LAMA4-219ENST00000522006 LYNX1G3V0Z9 82 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 THBDP07204 575 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 LYNX1P0DP58 116 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 PAX8Q06710 450 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 ZCCHC24Q8N2G6 241 aaKnown RBP9.43□□□□□ -0.9
LAMA4-219ENST00000522006 ERG28Q9UKR5 140 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 NPIPB5A8MRT5 1133 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 OVOL1O14753 267 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 SELENOKQ9Y6D0 94 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 ZNF883P0CG24 379 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 TREML4Q6UXN2 200 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 RNASE6Q93091 150 aaKnown RBP9.43□□□□□ -0.9
LAMA4-219ENST00000522006 MS4A6AQ9H2W1 248 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 ZNF319Q9P2F9 582 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
LAMA4-219ENST00000522006 PSME4Q14997 1843 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 TNFSF13O75888 250 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 NCR2O95944 276 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 S100A7L2Q5SY68 101 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 TMEM242Q9NWH2 141 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 SPRR3Q9UBC9 169 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 WDR83OSQ9Y284 106 aa9.43□□□□□ -0.9
LAMA4-219ENST00000522006 D6R8Y8 96 aa9.42□□□□□ -0.9
LAMA4-219ENST00000522006 AMBPP02760 352 aa9.42□□□□□ -0.9
LAMA4-219ENST00000522006 CD5P06127 495 aa9.42□□□□□ -0.9
LAMA4-219ENST00000522006 FGFBP3Q8TAT2 258 aa9.42□□□□□ -0.9
LAMA4-219ENST00000522006 GTF3AQ92664 365 aaKnown RBP9.42□□□□□ -0.9
LAMA4-219ENST00000522006 C3orf36Q3SXR2 165 aa9.42□□□□□ -0.9
LAMA4-219ENST00000522006 CHCHD5Q9BSY4 110 aa9.42□□□□□ -0.9
LAMA4-219ENST00000522006 ZNF415Q09FC8 603 aa9.42□□□□□ -0.9
LAMA4-219ENST00000522006 TMEM86BQ8N661 226 aa9.42□□□□□ -0.9
LAMA4-219ENST00000522006 VGLL1Q99990 258 aa9.42□□□□□ -0.9
LAMA4-219ENST00000522006 MLNRO43193 412 aa9.42□□□□□ -0.9
LAMA4-219ENST00000522006 SMPXQ9UHP9 88 aa9.42□□□□□ -0.9
LAMA4-219ENST00000522006 IGHV3-73A0A0B4J1V6 119 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 PINLYPA6NC86 204 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 MBNL3Q9NUK0 354 aaKnown RBP9.41□□□□□ -0.9
LAMA4-219ENST00000522006 RPL15P61313 204 aaKnown RBP9.41□□□□□ -0.9
LAMA4-219ENST00000522006 NSUN5P1Q3KNT7 163 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 GATD1Q8NB37 220 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 DEFB104AQ8WTQ1 72 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 NAA38Q9BRA0 125 aaKnown RBP9.41□□□□□ -0.9
LAMA4-219ENST00000522006 MORN3Q6PF18 240 aaPredicted RBP9.41□□□□□ -0.9
LAMA4-219ENST00000522006 EXOC3-AS1Q8N2X6 119 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 GGTLC1Q9BX51 225 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 TMEM8BA6NDV4 472 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 COLCA2A8K830 154 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 TMEM238C9JI98 176 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 IGHV1-46P01743 117 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 MAJINQ3KP22 176 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 SBF2Q86WG5 1849 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 FXYD7P58549 80 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 SRSF7Q16629 238 aaKnown RBP eCLIP9.41□□□□□ -0.9
LAMA4-219ENST00000522006 MGST2Q99735 147 aa9.41□□□□□ -0.9
LAMA4-219ENST00000522006 PDCD11Q14690 1871 aaKnown RBP9.41□□□□□ -0.9
LAMA4-219ENST00000522006 CEACAM1P13688 526 aa9.4□□□□□ -0.9
LAMA4-219ENST00000522006 PRTN3P24158 256 aa9.4□□□□□ -0.9
LAMA4-219ENST00000522006 ACTL10Q5JWF8 245 aa9.4□□□□□ -0.9
LAMA4-219ENST00000522006 OR9G4Q8NGQ1 327 aa9.4□□□□□ -0.9
LAMA4-219ENST00000522006 LINC00527Q9UJ94 153 aa9.4□□□□□ -0.9
LAMA4-219ENST00000522006 IGLV3-32A0A0A0MS00 114 aa9.4□□□□□ -0.9
LAMA4-219ENST00000522006 PMS2P5A8MQ11 134 aa9.4□□□□□ -0.9
LAMA4-219ENST00000522006 SCRT1Q9BWW7 348 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms