RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 LYPD6BQ8NI32 183 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 ACY3Q96HD9 319 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 GGTLC1Q9BX51 225 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 MAP1LC3BQ9GZQ8 125 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 EIF5A2Q9GZV4 153 aaKnown RBP6.7□□□□□ -1.34
VAPB-206ENST00000520497 KLK9Q9UKQ9 250 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 DNAJC9-AS1A6NH13 148 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 ZFP92A6NM28 416 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 CLDN34H7C241 214 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 B2MP61769 119 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 RHOBP62745 196 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 TOR2AQ5JU69 321 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 FAM122CQ6P4D5 195 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 RBMS3Q6XE24 437 aaKnown RBP6.69□□□□□ -1.34
VAPB-206ENST00000520497 SLC35E3Q7Z769 313 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 S100A7AQ86SG5 101 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 OR1L4Q8NGR5 311 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 FAM110DQ8TAY7 271 aaPredicted RBP6.69□□□□□ -1.34
VAPB-206ENST00000520497 MBD3L1Q8WWY6 194 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 RCC1LQ96I51 464 aaKnown RBP6.69□□□□□ -1.34
VAPB-206ENST00000520497 FANCD2OSQ96PS1 177 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 PFDN5Q99471 154 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 MGST2Q99735 147 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 FNDC4Q9H6D8 234 aaPredicted RBP6.69□□□□□ -1.34
VAPB-206ENST00000520497 ESM1Q9NQ30 184 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 RPRMQ9NS64 109 aa6.69□□□□□ -1.34
VAPB-206ENST00000520497 LSM4Q9Y4Z0 139 aaKnown RBP6.69□□□□□ -1.34
VAPB-206ENST00000520497 IGLV11-55A0A075B6I3 123 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 G3V318 75 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 CRLF1O75462 422 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 OR10J1P30954 320 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 S100A7P31151 101 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 RND2P52198 227 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 TAS2R45P59539 299 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 SRSF2Q01130 221 aaKnown RBP6.68□□□□□ -1.34
VAPB-206ENST00000520497 GAMTQ14353 236 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 GUK1Q16774 197 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 ECSCRQ19T08 205 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 ACSM6Q6P461 480 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 UNQ5815/PRO19632Q6UWF5 114 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 LCN15Q6UWW0 184 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 CYP2G1PQ6ZSU1 146 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 Q8N2B8 174 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 STPG3Q8N7X2 389 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 THAP8Q8NA92 274 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 BPIFCQ8NFQ6 507 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 WNT10AQ9GZT5 417 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 ZNF702PQ9H963 129 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 MANBALQ9NQG1 85 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 TNFRSF19Q9NS68 423 aa6.68□□□□□ -1.34
VAPB-206ENST00000520497 GAR1Q9NY12 217 aaKnown RBP6.68□□□□□ -1.34
VAPB-206ENST00000520497 JMJD1CQ15652 2540 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 TRAV30A0A087WSZ9 112 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 TRBV9A0A0B4J1U6 114 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 TRAV41A0A0B4J266 112 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 TCRBV4S1A1TA0A5B7 111 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 RBFOX3A6NFN3 312 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 SEC14L6B5MCN3 397 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 I3L2K1 104 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 K7EIM0 57 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 AP4M1O00189 453 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 COX7A2P2O60397 106 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 BRI3O95415 125 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 CXorf1O96002 111 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 PPIFP30405 207 aaKnown RBP6.67□□□□□ -1.34
VAPB-206ENST00000520497 NPBWR1P48145 328 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 PSMB3P49720 205 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 FHITP49789 147 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 HILS1P60008 231 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 CFHR3Q02985 330 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 KHDC3LQ587J8 217 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 C9orf152Q5JTZ5 239 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 MIC13Q5XKP0 118 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 CCDC28AQ8IWP9 274 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 IQCF2Q8IXL9 164 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 TMEM116Q8NCL8 245 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 OR5T1Q8NG75 326 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 DUX5Q96PT3 197 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 TRGV9Q99603 122 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 MRPL32Q9BYC8 188 aaKnown RBP6.67□□□□□ -1.34
VAPB-206ENST00000520497 PRSS22Q9GZN4 317 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 NPFFR1Q9GZQ6 430 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 SLC25A22Q9H936 323 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 SLC45A2Q9UMX9 530 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 RNF24Q9Y225 148 aa6.67□□□□□ -1.34
VAPB-206ENST00000520497 IGKV1OR2-108A0A075B7D4 117 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 ELOA3CA0A087WX78 387 aaPredicted RBP6.66□□□□□ -1.34
VAPB-206ENST00000520497 A0A1B0GV50 99 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 TMEM218A2RU14 115 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 F8W036 122 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 NDUFS6O75380 124 aaKnown RBP6.66□□□□□ -1.34
VAPB-206ENST00000520497 RNASE1P07998 156 aaKnown RBP6.66□□□□□ -1.34
VAPB-206ENST00000520497 BCL2P10415 239 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 MFAP4P55083 255 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 RPL15P61313 204 aaKnown RBP6.66□□□□□ -1.34
VAPB-206ENST00000520497 PMS2P11Q13670 270 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 MLANAQ16655 118 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 TMEM95Q3KNT9 176 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 ZNF506Q5JVG8 444 aa6.66□□□□□ -1.34
VAPB-206ENST00000520497 RPP25LQ8N5L8 163 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms