RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 PFN4Q8NHR9 129 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 MRPS24Q96EL2 167 aaKnown RBP2.03□□□□□ -2.08
SQLE-204ENST00000520493 Q9BRP9 147 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 MAP1LC3BQ9GZQ8 125 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 TMEM133Q9H2Q1 129 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 CCL26Q9Y258 94 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 UNC80Q8N2C7 3258 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 GREB1Q4ZG55 1949 aa2.03□□□□□ -2.08
SQLE-204ENST00000520493 ECM29Q5VYK3 1845 aa2.03□□□□□ -2.09
SQLE-204ENST00000520493 NOTCH1P46531 2555 aa2.03□□□□□ -2.09
SQLE-204ENST00000520493 MYO9AB2RTY4 2548 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 ARHGAP32A7KAX9 2087 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 DUXBA0A1W2PPF3 345 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 RIIAD1A6NNX1 92 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 TSTD3H0UI37 97 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 CYB5BO43169 146 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 P0C880 135 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 SRIP30626 198 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 KISS1Q15726 138 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 TAF9Q16594 264 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 DCUN1D2Q6PH85 259 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 TOMM20LQ6UXN7 152 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 HIST3H2BBQ8N257 126 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 FAM24BQ8N5W8 94 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 OR51T1Q8NGJ9 327 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 OR10K1Q8NGX5 313 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 C11orf40Q8WZ69 217 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 C20orf166-AS1Q96NR2 134 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 NDUFB11Q9NX14 153 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 MALRD1Q5VYJ5 2156 aa2.02□□□□□ -2.09
SQLE-204ENST00000520493 RANBP2P49792 3224 aaKnown RBP2.02□□□□□ -2.09
SQLE-204ENST00000520493 NCOR2Q9Y618 2525 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 TTC28Q96AY4 2481 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 MED14O60244 1454 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 DENND4CQ5VZ89 1909 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 A0A087X0T9 212 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 IGHV1-18A0A0C4DH31 117 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 TRBV10-2A0A0K0K1G8 114 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 TMEM212A6NML5 194 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 E7EQL1 145 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 GLRXP35754 106 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 CLVS1Q8IUQ0 354 aaPredicted RBP2.01□□□□□ -2.09
SQLE-204ENST00000520493 DYDC1Q8WWB3 177 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 DNAJC9Q8WXX5 260 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 SLAMF6Q96DU3 332 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 LAMTOR3Q9UHA4 124 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 CC2D2AQ9P2K1 1620 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 KDM5BQ9UGL1 1544 aa2.01□□□□□ -2.09
SQLE-204ENST00000520493 MUC2Q02817 5179 aa2□□□□□ -2.09
SQLE-204ENST00000520493 MYH7BA7E2Y1 1941 aa2□□□□□ -2.09
SQLE-204ENST00000520493 IGKV3D-11A0A0A0MRZ8 115 aa2□□□□□ -2.09
SQLE-204ENST00000520493 A0A0D9SEW6 157 aa2□□□□□ -2.09
SQLE-204ENST00000520493 LOC105371267A0A1B0GV96 52 aa2□□□□□ -2.09
SQLE-204ENST00000520493 PRORSD1PA6NEY8 169 aa2□□□□□ -2.09
SQLE-204ENST00000520493 ZNF860A6NHJ4 632 aa2□□□□□ -2.09
SQLE-204ENST00000520493 E7EQ34 232 aa2□□□□□ -2.09
SQLE-204ENST00000520493 BANF1O75531 89 aa2□□□□□ -2.09
SQLE-204ENST00000520493 TCL1BO95988 128 aa2□□□□□ -2.09
SQLE-204ENST00000520493 IGKV1-16P04430 117 aa2□□□□□ -2.09
SQLE-204ENST00000520493 CSN2P05814 226 aa2□□□□□ -2.09
SQLE-204ENST00000520493 FUSP35637 526 aaKnown RBP eCLIP2□□□□□ -2.09
SQLE-204ENST00000520493 SUPT4H1P63272 117 aaKnown RBP2□□□□□ -2.09
SQLE-204ENST00000520493 BPIFA4PQ86YQ2 179 aa2□□□□□ -2.09
SQLE-204ENST00000520493 SIGLECL1Q8N7X8 197 aa2□□□□□ -2.09
SQLE-204ENST00000520493 OR8D4Q8NGM9 314 aa2□□□□□ -2.09
SQLE-204ENST00000520493 SKA2Q8WVK7 121 aaPredicted RBP2□□□□□ -2.09
SQLE-204ENST00000520493 TMEM106AQ96A25 262 aa2□□□□□ -2.09
SQLE-204ENST00000520493 DNAJC30Q96LL9 226 aa2□□□□□ -2.09
SQLE-204ENST00000520493 OSTCQ9NRP0 149 aa2□□□□□ -2.09
SQLE-204ENST00000520493 PRO2289Q9P1D8 64 aa2□□□□□ -2.09
SQLE-204ENST00000520493 HEATR5AQ86XA9 2040 aa2□□□□□ -2.09
SQLE-204ENST00000520493 FHAD1B1AJZ9 1412 aa2□□□□□ -2.09
SQLE-204ENST00000520493 SETD5Q9C0A6 1442 aa2□□□□□ -2.09
SQLE-204ENST00000520493 ANKHD1Q8IWZ3 2542 aaKnown RBP1.99□□□□□ -2.09
SQLE-204ENST00000520493 IGKV1-9A0A0C4DH69 117 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 A0A0D9SG52 128 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 A0A1W2PRE2 83 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 MEIS3P1A6NDR6 274 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 GGCTO75223 188 aaKnown RBP1.99□□□□□ -2.09
SQLE-204ENST00000520493 PPBPP02775 128 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 COX6A1P12074 109 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 OGNP20774 298 aaKnown RBP1.99□□□□□ -2.09
SQLE-204ENST00000520493 PSMD8P48556 350 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 NDUFA5Q16718 116 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 FAM27BQ5VT28 67 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 HCP5Q6MZN7 132 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 OR52R1Q8NGF1 315 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 CANT1Q8WVQ1 401 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 ADAT3Q96EY9 351 aaPredicted RBP1.99□□□□□ -2.09
SQLE-204ENST00000520493 YPEL2Q96QA6 119 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 GINS4Q9BRT9 223 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 DOHHQ9BU89 302 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 RTL8AQ9BWD3 113 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 OR2J1Q9GZK6 312 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 BATF3Q9NR55 127 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 SPANXA1Q9NS26 97 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 CKLFQ9UBR5 152 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 EPDR1Q9UM22 224 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 GINS2Q9Y248 185 aa1.99□□□□□ -2.09
SQLE-204ENST00000520493 HSPB11Q9Y547 144 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms