RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 XKRY2A2RUG3 117 aa20.54■□□□□ 0.88
COL13A1-213ENST00000520267 FABP1P07148 127 aa20.54■□□□□ 0.88
COL13A1-213ENST00000520267 KLRD1Q13241 179 aa20.54■□□□□ 0.88
COL13A1-213ENST00000520267 SSBP3Q9BWW4 388 aaPredicted RBP20.54■□□□□ 0.88
COL13A1-213ENST00000520267 OR51M1Q9H341 326 aa20.54■□□□□ 0.88
COL13A1-213ENST00000520267 F11RQ9Y624 299 aaKnown RBP20.54■□□□□ 0.88
COL13A1-213ENST00000520267 HTR1DP28221 377 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 LINC00305Q7Z4B0 112 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 OR11H6Q8NGC7 330 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 SRSF12Q8WXF0 261 aaKnown RBP20.53■□□□□ 0.88
COL13A1-213ENST00000520267 BTF3L4Q96K17 158 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 RNF5Q99942 180 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 IL36BQ9NZH7 164 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 TACC2O95359 2948 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 LOC105371242A0A075B767 164 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 TMEM116Q8NCL8 245 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 TRGV9Q99603 122 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 HIST1H2BLQ99880 126 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 HILPDAQ9Y5L2 63 aa20.53■□□□□ 0.88
COL13A1-213ENST00000520267 ORM2P19652 201 aa20.52■□□□□ 0.88
COL13A1-213ENST00000520267 PLGLAQ15195 96 aa20.52■□□□□ 0.88
COL13A1-213ENST00000520267 DPM3Q9P2X0 92 aa20.52■□□□□ 0.88
COL13A1-213ENST00000520267 TRAPPC1Q9Y5R8 145 aa20.52■□□□□ 0.88
COL13A1-213ENST00000520267 ERVFC1-1P60608 527 aa20.52■□□□□ 0.88
COL13A1-213ENST00000520267 COA6Q5JTJ3 125 aaKnown RBP20.52■□□□□ 0.88
COL13A1-213ENST00000520267 CDPF1Q6NVV7 123 aa20.52■□□□□ 0.88
COL13A1-213ENST00000520267 DTX2Q86UW9 622 aa20.52■□□□□ 0.88
COL13A1-213ENST00000520267 LHFPL4Q7Z7J7 247 aa20.51■□□□□ 0.87
COL13A1-213ENST00000520267 OR1B1Q8NGR6 318 aa20.51■□□□□ 0.87
COL13A1-213ENST00000520267 GSX1Q9H4S2 264 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-213ENST00000520267 V9GYV3 84 aa20.51■□□□□ 0.87
COL13A1-213ENST00000520267 CORTO00230 105 aa20.51■□□□□ 0.87
COL13A1-213ENST00000520267 C22orf15Q8WYQ4 148 aa20.51■□□□□ 0.87
COL13A1-213ENST00000520267 FXYD5Q96DB9 178 aa20.51■□□□□ 0.87
COL13A1-213ENST00000520267 M0R1W7 72 aa20.5■□□□□ 0.87
COL13A1-213ENST00000520267 IGLV2-8P01709 118 aa20.5■□□□□ 0.87
COL13A1-213ENST00000520267 SNRPCP09234 159 aaKnown RBP20.5■□□□□ 0.87
COL13A1-213ENST00000520267 CFHR4Q92496 578 aa20.5■□□□□ 0.87
COL13A1-213ENST00000520267 IGF2BP2-AS1Q96M15 143 aa20.5■□□□□ 0.87
COL13A1-213ENST00000520267 MMDQ15546 238 aa20.5■□□□□ 0.87
COL13A1-213ENST00000520267 PRORYQ9H606 182 aa20.5■□□□□ 0.87
COL13A1-213ENST00000520267 A0A1W2PRD5 423 aa20.49■□□□□ 0.87
COL13A1-213ENST00000520267 A0A1W2PRF3 423 aa20.49■□□□□ 0.87
COL13A1-213ENST00000520267 A0A1W2PRM7 423 aa20.49■□□□□ 0.87
COL13A1-213ENST00000520267 LINC00587B1AMM8 73 aa20.49■□□□□ 0.87
COL13A1-213ENST00000520267 PAX2Q02962 417 aa20.49■□□□□ 0.87
COL13A1-213ENST00000520267 TIGITQ495A1 244 aa20.49■□□□□ 0.87
COL13A1-213ENST00000520267 PACRGQ96M98 296 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-213ENST00000520267 CD24P25063 80 aa20.48■□□□□ 0.87
COL13A1-213ENST00000520267 CDKN1AP38936 164 aa20.48■□□□□ 0.87
COL13A1-213ENST00000520267 PDLIM4P50479 330 aa20.48■□□□□ 0.87
COL13A1-213ENST00000520267 ZNF329Q86UD4 541 aa20.48■□□□□ 0.87
COL13A1-213ENST00000520267 LINC00479Q96M42 142 aa20.48■□□□□ 0.87
COL13A1-213ENST00000520267 RNASE7Q9H1E1 156 aaKnown RBP20.48■□□□□ 0.87
COL13A1-213ENST00000520267 ODF3BA8MYP8 253 aa20.48■□□□□ 0.87
COL13A1-213ENST00000520267 PRTN3P24158 256 aa20.48■□□□□ 0.87
COL13A1-213ENST00000520267 PERPQ96FX8 193 aa20.48■□□□□ 0.87
COL13A1-213ENST00000520267 HIVEP3Q5T1R4 2406 aa20.47■□□□□ 0.87
COL13A1-213ENST00000520267 NDUFS7O75251 213 aa20.47■□□□□ 0.87
COL13A1-213ENST00000520267 GCGP01275 180 aa20.47■□□□□ 0.87
COL13A1-213ENST00000520267 FBLN7Q53RD9 439 aa20.47■□□□□ 0.87
COL13A1-213ENST00000520267 CNIH1O95406 144 aa20.47■□□□□ 0.87
COL13A1-213ENST00000520267 CNN1P51911 297 aaKnown RBP20.47■□□□□ 0.87
COL13A1-213ENST00000520267 AMBPP02760 352 aa20.46■□□□□ 0.87
COL13A1-213ENST00000520267 RPEL1Q2QD12 228 aa20.46■□□□□ 0.87
COL13A1-213ENST00000520267 FAM209BQ5JX69 171 aa20.46■□□□□ 0.87
COL13A1-213ENST00000520267 WNT10AQ9GZT5 417 aa20.46■□□□□ 0.87
COL13A1-213ENST00000520267 CHD8Q9HCK8 2581 aa20.46■□□□□ 0.87
COL13A1-213ENST00000520267 NBR2O15453 112 aa20.46■□□□□ 0.87
COL13A1-213ENST00000520267 CEACAM3P40198 252 aa20.46■□□□□ 0.87
COL13A1-213ENST00000520267 YPEL3P61236 119 aaPredicted RBP20.46■□□□□ 0.87
COL13A1-213ENST00000520267 TRAV9-1A0A075B6T8 112 aa20.45■□□□□ 0.86
COL13A1-213ENST00000520267 I3L2K1 104 aa20.45■□□□□ 0.86
COL13A1-213ENST00000520267 NCOR2Q9Y618 2525 aa20.45■□□□□ 0.86
COL13A1-213ENST00000520267 HYPMO75409 117 aa20.44■□□□□ 0.86
COL13A1-213ENST00000520267 MGST1P10620 155 aaKnown RBP20.44■□□□□ 0.86
COL13A1-213ENST00000520267 GPR6P46095 362 aaPredicted RBP20.44■□□□□ 0.86
COL13A1-213ENST00000520267 FXYD3Q14802 87 aa20.44■□□□□ 0.86
COL13A1-213ENST00000520267 OSTCQ9NRP0 149 aa20.44■□□□□ 0.86
COL13A1-213ENST00000520267 SPTBN1Q01082 2364 aaKnown RBP20.44■□□□□ 0.86
COL13A1-213ENST00000520267 NHLRC2Q8NBF2 726 aa20.44■□□□□ 0.86
COL13A1-213ENST00000520267 CDC42EP3Q9UKI2 254 aa20.44■□□□□ 0.86
COL13A1-213ENST00000520267 PEX7O00628 323 aa20.43■□□□□ 0.86
COL13A1-213ENST00000520267 SFTPCP11686 197 aa20.43■□□□□ 0.86
COL13A1-213ENST00000520267 ZFP36P26651 326 aaKnown RBP20.43■□□□□ 0.86
COL13A1-213ENST00000520267 ADMP35318 185 aa20.43■□□□□ 0.86
COL13A1-213ENST00000520267 TAS2R60P59551 318 aa20.43■□□□□ 0.86
COL13A1-213ENST00000520267 FRMD6-AS1P0C7T7 363 aa20.43■□□□□ 0.86
COL13A1-213ENST00000520267 IGLC1P0CG04 106 aa20.43■□□□□ 0.86
COL13A1-213ENST00000520267 MYCNOSP40205 109 aa20.43■□□□□ 0.86
COL13A1-213ENST00000520267 RANP62826 216 aaKnown RBP20.43■□□□□ 0.86
COL13A1-213ENST00000520267 VMO1Q7Z5L0 202 aa20.43■□□□□ 0.86
COL13A1-213ENST00000520267 OR8I2Q8N0Y5 310 aa20.43■□□□□ 0.86
COL13A1-213ENST00000520267 NPBQ8NG41 125 aa20.43■□□□□ 0.86
COL13A1-213ENST00000520267 BLNKQ8WV28 456 aa20.43■□□□□ 0.86
COL13A1-213ENST00000520267 SRSF8Q9BRL6 282 aaKnown RBP20.43■□□□□ 0.86
COL13A1-213ENST00000520267 ISLRO14498 428 aa20.42■□□□□ 0.86
COL13A1-213ENST00000520267 NDUFA3O95167 84 aa20.42■□□□□ 0.86
COL13A1-213ENST00000520267 CBLN1P23435 193 aa20.42■□□□□ 0.86
COL13A1-213ENST00000520267 UQCRFS1P47985 274 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms