RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SLC25A45Q8N413 288 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM252Q8N6L7 170 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 FADS6Q8N9I5 356 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 CCDC71LQ8N9Z2 235 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 FER1L6-AS1Q8NA97 138 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 GATSQ8NAP1 163 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR2M3Q8NG83 312 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR4C5Q8NGB2 326 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR52M1Q8NGK5 317 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR2G3Q8NGZ4 309 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 FNDC9Q8TBE3 224 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 LMX1AQ8TE12 382 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 TSEN15Q8WW01 171 aaKnown RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR5P3Q8WZ94 311 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 CLDN23Q96B33 292 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 GNPNAT1Q96EK6 184 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 ADAT3Q96EY9 351 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 REEP6Q96HR9 211 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR2V2Q96R30 315 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 HSPB9Q9BQS6 159 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 VPS25Q9BRG1 176 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 PSMG3Q9BT73 122 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 RSG1Q9BU20 258 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 PBOV1Q9GZY1 135 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF160Q9HCG1 818 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 SH2D2AQ9NP31 389 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 MANBALQ9NQG1 85 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 RPRMQ9NS64 109 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 SLC35D1Q9NTN3 355 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM38BQ9NVV0 291 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 BET1LQ9NYM9 111 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 AK3Q9UIJ7 227 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF391Q9UJN7 358 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 C14orf166Q9Y224 244 aaKnown RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 CENPFP49454 3210 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 DIDO1Q9BTC0 2240 aaKnown RBP2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 SEC16AO15027 2179 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 PTPRBP23467 1997 aa2.23□□□□□ -2.05
HMGB1P41-201ENST00000520234 UNC13CQ8NB66 2214 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 C2orf16Q68DN1 1984 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 TRAV26-1A0A087WT03 109 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGKV1D-43A0A0B4J1Z2 117 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGKV1-9A0A0C4DH69 117 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 DUXBA0A1W2PPF3 345 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 NKX2-6A6NCS4 301 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 GJE1A6NN92 205 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 FAM166BA8MTA8 275 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF878C9JN71 531 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 SOCS1O15524 211 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 XRCC2O43543 280 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 TRAF3IP2O43734 574 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 CD5LO43866 347 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 PRH1P02810 166 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 CSN2P05814 226 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 HPNP05981 417 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 C3orf79P0CE67 100 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF728P0DKX0 622 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 CD1BP29016 333 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF93P35789 620 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 RPS27P42677 84 aaKnown RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 REG1BP48304 166 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 DUSP3P51452 185 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 CEBPGP53567 150 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 FBXW4P57775 412 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF121P58317 390 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 TPPP2P59282 170 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 TAS2R46P59540 309 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 RPL23AP62750 156 aaKnown RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 MEF2BQ02080 365 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 BAXQ07812 192 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 PSG7Q13046 419 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF266Q14584 549 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 MSMO1Q15800 293 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 NNATQ16517 81 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 HLA-DRB5Q30154 266 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 SPATA45Q537H7 98 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 NMSQ5H8A3 153 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 BVES-AS1Q5T3Y7 98 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 FAM27BQ5VT28 67 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 RAET1LQ5VY80 246 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM42Q69YG0 159 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 GLIPR1L1Q6UWM5 242 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 WDR82Q6UXN9 313 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 LYZL2Q7Z4W2 148 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 ABHD12BQ7Z5M8 362 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM123Q8N131 208 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 LGI3Q8N145 548 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 LINC01561Q8N1V8 128 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 MTURNQ8N3F0 131 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 C17orf78Q8N4C9 275 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 C5orf17Q8NAS9 161 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZFP62Q8NB50 900 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 CHST4Q8NCG5 386 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 ST6GALNAC3Q8NDV1 305 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 TSTD1Q8NFU3 115 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 STXBP6Q8NFX7 210 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 SGMS2Q8NHU3 365 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 CMTM2Q8TAZ6 248 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 SLC25A40Q8TBP6 338 aa2.22□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR51E1Q8TCB6 317 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms