RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 HABP2Q14520 560 aaPredicted RBP6.32□□□□□ -1.4
CLK4-203ENST00000519583 SPATA31B1PQ5VZV4 182 aa6.32□□□□□ -1.4
CLK4-203ENST00000519583 SLC35E3Q7Z769 313 aa6.32□□□□□ -1.4
CLK4-203ENST00000519583 RNASEH2CQ8TDP1 164 aaKnown RBP6.32□□□□□ -1.4
CLK4-203ENST00000519583 ABHD5Q8WTS1 349 aa6.32□□□□□ -1.4
CLK4-203ENST00000519583 PLXNB1O43157 2135 aa6.32□□□□□ -1.4
CLK4-203ENST00000519583 ATRQ13535 2644 aa6.32□□□□□ -1.4
CLK4-203ENST00000519583 PAGE4O60829 102 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 MOSP00540 346 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 MFAP2P55001 183 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 MEF2BQ02080 365 aaPredicted RBP6.31□□□□□ -1.4
CLK4-203ENST00000519583 MRPL41Q8IXM3 137 aaKnown RBP6.31□□□□□ -1.4
CLK4-203ENST00000519583 SRSF12Q8WXF0 261 aaKnown RBP6.31□□□□□ -1.4
CLK4-203ENST00000519583 MISP3Q96FF7 219 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 EAF1Q96JC9 268 aaPredicted RBP6.31□□□□□ -1.4
CLK4-203ENST00000519583 DUX5Q96PT3 197 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 SEPSECSQ9HD40 501 aaKnown RBP6.31□□□□□ -1.4
CLK4-203ENST00000519583 MANBALQ9NQG1 85 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 MRPL36Q9P0J6 103 aaKnown RBP6.31□□□□□ -1.4
CLK4-203ENST00000519583 CUBNO60494 3623 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 TEX22C9J3V5 150 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 NBR2O15453 112 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 ARL14EPLP0DKL9 152 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 ATF4P18848 351 aaPredicted RBP6.31□□□□□ -1.4
CLK4-203ENST00000519583 HILS1P60008 231 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 JMJD8Q96S16 334 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 STAG3L2P0CL84 134 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 STAG3L3P0CL85 134 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 UBE2G2P60604 165 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 MINOS1Q5TGZ0 78 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 CCDC144NLQ6NUI1 221 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 NPIPB3Q92617 1050 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 NIPSNAP3BQ9BS92 247 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 ESM1Q9NQ30 184 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 SMCO4Q9NRQ5 59 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 TNFRSF19Q9NS68 423 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 MINOS1-NBL1R4GNA1 71 aa6.31□□□□□ -1.4
CLK4-203ENST00000519583 RHOBP62745 196 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 RHEBQ15382 184 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 OR4F5Q8NH21 305 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 OR4F4Q96R69 305 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 IGHV3-21A0A0B4J1V1 117 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 CNIH1O95406 144 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 RND2P52198 227 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 FAM78BQ5VT40 261 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 CYP2G1PQ6ZSU1 146 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 MIR17HGQ75NE6 70 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 ZNF114Q8NC26 417 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 OR2T10Q8NGZ9 312 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 DNAJC9-AS1A6NH13 148 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 OOSP1A8MZH6 123 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 HOXA3O43365 443 aaPredicted RBP6.3□□□□□ -1.4
CLK4-203ENST00000519583 NDUFA3O95167 84 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 CXorf1O96002 111 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 TAGLN2P37802 199 aaKnown RBP6.3□□□□□ -1.4
CLK4-203ENST00000519583 NPBQ8NG41 125 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 ISOC2Q96AB3 205 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 TVP23CQ96ET8 276 aa6.3□□□□□ -1.4
CLK4-203ENST00000519583 F11RQ9Y624 299 aaKnown RBP6.3□□□□□ -1.4
CLK4-203ENST00000519583 ATP5G3P48201 142 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 KIAA0141Q14154 515 aaPredicted RBP6.29□□□□□ -1.4
CLK4-203ENST00000519583 ZNF674Q2M3X9 581 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 CST9LP1Q5W188 147 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 PVRIGQ6DKI7 326 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 Q6YL49 198 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 OR1P1Q8NH06 330 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 RPUSD4Q96CM3 377 aaKnown RBP6.29□□□□□ -1.4
CLK4-203ENST00000519583 SLC25A33Q9BSK2 321 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 FAM103A1Q9BTL3 118 aaKnown RBP6.29□□□□□ -1.4
CLK4-203ENST00000519583 DMRT1Q9Y5R6 373 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 IGKV1D-37A0A075B6S9 117 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 ZNF727A8MUV8 499 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 C11orf94C9JXX5 98 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 GCHFRP30047 84 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 ZNF90Q03938 601 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 FXYD3Q14802 87 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 C5orf64Q2M2E5 130 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 TBL2Q9Y4P3 447 aaKnown RBP6.29□□□□□ -1.4
CLK4-203ENST00000519583 NCBP2LA6PVI3 153 aaKnown RBP6.29□□□□□ -1.4
CLK4-203ENST00000519583 CRYGCP07315 174 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 KRTAP24-1Q3LI83 254 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 AJUBAQ96IF1 538 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 SMIM7Q9BQ49 75 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 PRDM13Q9H4Q3 707 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 DOK5Q9P104 306 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 FUT9Q9Y231 359 aa6.29□□□□□ -1.4
CLK4-203ENST00000519583 COLCA2A8K830 154 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 TMEM250H0YL14 139 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 MT-CO2P00403 227 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 IGHV4-59P01825 116 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 TMEM11P17152 192 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 KRTAP21-3Q3LHN1 58 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 ETFRF1Q6IPR1 90 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 Q8N6K4 173 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 THAP8Q8NA92 274 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 TMEM37Q8WXS4 190 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 TMEM158Q8WZ71 300 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 TCRBV4S1A1TA0A5B7 111 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 OR5G3P0C626 314 aa6.28□□□□□ -1.4
CLK4-203ENST00000519583 OR51G1Q8NGK1 321 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms