RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 VAX2Q9UIW0 290 aa5.73□□□□□ -1.49
MRPS28-205ENST00000519386 KLK9Q9UKQ9 250 aa5.73□□□□□ -1.49
MRPS28-205ENST00000519386 SLC45A2Q9UMX9 530 aa5.73□□□□□ -1.49
MRPS28-205ENST00000519386 FAM96BQ9Y3D0 163 aa5.73□□□□□ -1.49
MRPS28-205ENST00000519386 HILPDAQ9Y5L2 63 aa5.73□□□□□ -1.49
MRPS28-205ENST00000519386 SOX21Q9Y651 276 aaPredicted RBP5.73□□□□□ -1.49
MRPS28-205ENST00000519386 SVEP1Q4LDE5 3571 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 CENPVL3A0A0U1RRI6 287 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 A0A1W2PRD5 423 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 A0A1W2PRF3 423 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 A0A1W2PRM7 423 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 TCRBV4S1A1TA0A5B7 111 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 E7EUB6 86 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 CXorf1O96002 111 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 OPN1MWP04001 364 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 FABP1P07148 127 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 STAG3L2P0CL84 134 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 STAG3L3P0CL85 134 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 OPN1MW2P0DN77 364 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 OPN1MW3P0DN78 364 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 TMEM11P17152 192 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 CTRB1P17538 263 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 CNTFRP26992 372 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 RIPPLY3P57055 190 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 TAS2R45P59539 299 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 PNRC1Q12796 327 aaPredicted RBP5.72□□□□□ -1.49
MRPS28-205ENST00000519386 HNF4GQ14541 408 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 ICAM4Q14773 271 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 RHEBQ15382 184 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 CTRB2Q6GPI1 263 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 BRD3OSQ6XYD6 125 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 PQLC2Q6ZP29 291 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 SSX7Q7RTT5 188 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 PRIMA1Q86XR5 153 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 BCL6BQ8N143 479 aaPredicted RBP5.72□□□□□ -1.49
MRPS28-205ENST00000519386 GATAD1Q8WUU5 269 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 ARPC1AQ92747 370 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 RITA1Q96K30 269 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 TRGV9Q99603 122 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 FBXL15Q9H469 300 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 SLC25A22Q9H936 323 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 RFNGQ9Y644 331 aa5.72□□□□□ -1.49
MRPS28-205ENST00000519386 IGKV1OR2-108A0A075B7D4 117 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 MDFIC2A0A1B0GVS7 189 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 PDE6DO43924 150 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 SCGB2A1O75556 95 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 CNIH1O95406 144 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 SRP19P09132 144 aaKnown RBP5.71□□□□□ -1.5
MRPS28-205ENST00000519386 OR5G3P0C626 314 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 LINC00869P0C866 280 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 AREGP15514 252 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 CRIP2P52943 208 aaPredicted RBP5.71□□□□□ -1.5
MRPS28-205ENST00000519386 PLP1P60201 277 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 CCL20P78556 96 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 DEFA5Q01523 94 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 HES1Q14469 280 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 FXYD3Q14802 87 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 FAM74A3Q4VXF1 159 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 SOHLH1Q5JUK2 328 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 MIC13Q5XKP0 118 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 FAM122CQ6P4D5 195 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 LCN15Q6UWW0 184 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 CYP2G1PQ6ZSU1 146 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 C9orf139Q6ZV77 190 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 C16orf82Q7Z2V1 217 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 SLC35E3Q7Z769 313 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 DYNAPQ8N1N2 210 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 OR1L4Q8NGR5 311 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 TCEAL7Q9BRU2 100 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 MEGF9Q9H1U4 602 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 FNDC4Q9H6D8 234 aaPredicted RBP5.71□□□□□ -1.5
MRPS28-205ENST00000519386 TMEM231Q9H6L2 316 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 GNG13Q9P2W3 67 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 ZNF580Q9UK33 172 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 FUT9Q9Y231 359 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 FBN1P35555 2871 aaKnown RBP5.71□□□□□ -1.5
MRPS28-205ENST00000519386 COL6A5A8TX70 2615 aa5.71□□□□□ -1.5
MRPS28-205ENST00000519386 A0A0U1RQK1 487 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 PSMB11A5LHX3 300 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 B4DEV8 164 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 C9JQL5 133 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 F6UZH7 168 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 M0QZK8 103 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 CLN5O75503 358 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 HIST1H1BP16401 226 aaKnown RBP5.7□□□□□ -1.5
MRPS28-205ENST00000519386 OR10J1P30954 320 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 FCGR2BP31994 310 aaPredicted RBP5.7□□□□□ -1.5
MRPS28-205ENST00000519386 RND2P52198 227 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 GNB1P62873 340 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 SRSF2Q01130 221 aaKnown RBP5.7□□□□□ -1.5
MRPS28-205ENST00000519386 SCGB2A2Q13296 93 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 GUCA2BQ16661 112 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 HAGHQ16775 308 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 DEFB112Q30KQ8 113 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 TTC9CQ8N5M4 171 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 SIGLECL1Q8N7X8 197 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 Q8N9W7 124 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 CLRN3Q8NCR9 226 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 OR4X1Q8NH49 305 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 C17orf50Q8WW18 174 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms