RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 ZNF48Q96MX3 618 aaPredicted RBP4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 RBM14Q96PK6 669 aaKnown RBP4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 FUT9Q9Y231 359 aa4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ZNF469Q96JG9 3925 aaPredicted RBP4.28□□□□□ -1.72
SCARNA20.4-201ENST00000516969 ACANP16112 2415 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 MXRA5Q9NR99 2828 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 IGLV11-55A0A075B6I3 123 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 IGHV3OR16-10A0A075B7F0 116 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 FAM74A7A6NL05 159 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TMEM250H0YL14 139 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 H3BQ15 152 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 PAGE4O60829 102 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 CLN5O75503 358 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 FSHBP01225 129 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 IGKV1-17P01599 117 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 IGLC1P0CG04 106 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 IGHV4-31P0DP07 118 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 CRIP2P52943 208 aaPredicted RBP4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 MEF2BQ02080 365 aaPredicted RBP4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 FAM74A3Q4VXF1 159 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 C19orf54Q5BKX5 351 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 FAM78BQ5VT40 261 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 BRD3OSQ6XYD6 125 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 PQLC2Q6ZP29 291 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 MIR17HGQ75NE6 70 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 ZNF503Q96F45 646 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 FAM167A-AS1Q96KT0 104 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TMEM68Q96MH6 324 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 PFDN5Q99471 154 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 RNF2Q99496 336 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 SSX3Q99909 188 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 RASL11BQ9BPW5 248 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 HSPB9Q9BQS6 159 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TXNDC17Q9BRA2 123 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 FAM103A1Q9BTL3 118 aaKnown RBP4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 MRPL32Q9BYC8 188 aaKnown RBP4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TNFRSF19Q9NS68 423 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TECRQ9NZ01 308 aaKnown RBP4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 SOX21Q9Y651 276 aaPredicted RBP4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 PDZD2O15018 2839 aa4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 SONP18583 2426 aaKnown RBP4.27□□□□□ -1.73
SCARNA20.4-201ENST00000516969 ELOA3CA0A087WX78 387 aaPredicted RBP4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TRBV9A0A0B4J1U6 114 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 IGHV3-21A0A0B4J1V1 117 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 C7orf77A4D0Y5 90 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 A6NDX4 124 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 LINC01548A6NM66 108 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 RNF223E7ERA6 249 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 F8W735 103 aaPredicted RBP4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TGFAP01135 160 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 C8orf88P0DMB2 117 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 NPPCP23582 126 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 FCGR2BP31994 310 aaPredicted RBP4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TAS2R45P59539 299 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 AKIRIN2Q53H80 203 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 Q5PR19 223 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 MORN5Q5VZ52 161 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 OR5T1Q8NG75 326 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 OR1L4Q8NGR5 311 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 FAM110DQ8TAY7 271 aaPredicted RBP4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 C22orf15Q8WYQ4 148 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 SLC25A2Q9BXI2 301 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 GSX1Q9H4S2 264 aaPredicted RBP4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TUBA4BQ9H853 241 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 SDF2L1Q9HCN8 221 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TMEM167BQ9NRX6 74 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 MOB4Q9Y3A3 225 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 YTHDF2Q9Y5A9 579 aaKnown RBP4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 ARL2-SNX15V9GYD0 113 aa4.26□□□□□ -1.73
SCARNA20.4-201ENST00000516969 FLNAP21333 2647 aaKnown RBP4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 UNC79Q9P2D8 2635 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 MYO9AB2RTY4 2548 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TRAV30A0A087WSZ9 112 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 A0A087WWC5 75 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TRAV5A0A0B4J249 113 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 B4DEV8 164 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 C11orf94C9JXX5 98 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 ATP6V0E1O15342 81 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 PDE6DO43924 150 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 COX7A2P2O60397 106 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 HYPMO75409 117 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 NDUFB8O95169 186 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 BRI3O95415 125 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TOMM40O96008 361 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 IGHG2P01859 326 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 IGF1P05019 195 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 PSG1P11464 419 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 HIST1H1BP16401 226 aaKnown RBP4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 MFAP4P55083 255 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 YPEL3P61236 119 aaPredicted RBP4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 RHEBQ15382 184 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TIGITQ495A1 244 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 AWAT1Q58HT5 328 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 C10orf113Q5VZT2 155 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 HIST2H2BCQ6DN03 193 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 ZNF343Q6P1L6 599 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 TMEM88Q6PEY1 159 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 UNQ5815/PRO19632Q6UWF5 114 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 C9orf139Q6ZV77 190 aa4.25□□□□□ -1.73
SCARNA20.4-201ENST00000516969 C16orf82Q7Z2V1 217 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms