RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 IFNA10P01566 189 aa13.56□□□□□ -0.24
CLDND1-220ENST00000508902 RBMY1DP0C7P1 496 aaKnown RBP13.56□□□□□ -0.24
CLDND1-220ENST00000508902 GTSCR1Q86UQ5 136 aa13.56□□□□□ -0.24
CLDND1-220ENST00000508902 ST8SIA2Q92186 375 aa13.56□□□□□ -0.24
CLDND1-220ENST00000508902 NPIPB3Q92617 1050 aa13.56□□□□□ -0.24
CLDND1-220ENST00000508902 KMT2CQ8NEZ4 4911 aaKnown RBP13.56□□□□□ -0.24
CLDND1-220ENST00000508902 CSMD3Q7Z407 3707 aa13.55□□□□□ -0.24
CLDND1-220ENST00000508902 TRAV25A0A0B4J276 109 aa13.55□□□□□ -0.24
CLDND1-220ENST00000508902 CCSO14618 274 aa13.55□□□□□ -0.24
CLDND1-220ENST00000508902 TSPAN4O14817 238 aa13.55□□□□□ -0.24
CLDND1-220ENST00000508902 POLR2GP62487 172 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLDND1-220ENST00000508902 ID3Q02535 119 aa13.55□□□□□ -0.24
CLDND1-220ENST00000508902 ODF3L2Q3SX64 289 aa13.55□□□□□ -0.24
CLDND1-220ENST00000508902 TM2D3Q9BRN9 247 aa13.55□□□□□ -0.24
CLDND1-220ENST00000508902 VSIRQ9H7M9 311 aa13.55□□□□□ -0.24
CLDND1-220ENST00000508902 CACFD1Q9UGQ2 172 aa13.55□□□□□ -0.24
CLDND1-220ENST00000508902 IGHV3-66A0A0C4DH42 116 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 RPS10-NUDT3A0A1W2PQS6 291 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 H3BP45 60 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 WRBO00258 174 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 SYNGR2O43760 224 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 NHLRC4P0CG21 123 aaPredicted RBP13.54□□□□□ -0.24
CLDND1-220ENST00000508902 SLC25A4P12235 298 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 OR10J1P30954 320 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 ZNF846Q147U1 533 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 HAGHQ16775 308 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 COQ8AQ8NI60 647 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 ACY3Q96HD9 319 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 WDR12Q9GZL7 423 aaKnown RBP13.54□□□□□ -0.24
CLDND1-220ENST00000508902 BATF3Q9NR55 127 aa13.54□□□□□ -0.24
CLDND1-220ENST00000508902 STARD9Q9P2P6 4700 aa13.53□□□□□ -0.24
CLDND1-220ENST00000508902 IGKV1OR2-108A0A075B7D4 117 aa13.53□□□□□ -0.24
CLDND1-220ENST00000508902 TRAV14DV4A0A0A6YYC5 116 aa13.53□□□□□ -0.24
CLDND1-220ENST00000508902 PIGBOS1A0A0B4J2F0 54 aa13.53□□□□□ -0.24
CLDND1-220ENST00000508902 OR11H12B2RN74 326 aa13.53□□□□□ -0.24
CLDND1-220ENST00000508902 CCNKO75909 580 aa13.53□□□□□ -0.24
CLDND1-220ENST00000508902 PAX9P55771 341 aa13.53□□□□□ -0.24
CLDND1-220ENST00000508902 GAMTQ14353 236 aa13.53□□□□□ -0.24
CLDND1-220ENST00000508902 USF2Q15853 346 aaPredicted RBP13.53□□□□□ -0.24
CLDND1-220ENST00000508902 SRD5A3Q9H8P0 318 aa13.53□□□□□ -0.24
CLDND1-220ENST00000508902 RCL1Q9Y2P8 373 aaKnown RBP13.53□□□□□ -0.24
CLDND1-220ENST00000508902 U3KQK5 164 aa13.53□□□□□ -0.24
CLDND1-220ENST00000508902 PMS2P5A8MQ11 134 aa13.52□□□□□ -0.25
CLDND1-220ENST00000508902 H2AFB2P0C5Z0 115 aa13.52□□□□□ -0.25
CLDND1-220ENST00000508902 ZBTB8BQ8NAP8 495 aaPredicted RBP13.52□□□□□ -0.25
CLDND1-220ENST00000508902 OR1S2Q8NGQ3 325 aa13.52□□□□□ -0.25
CLDND1-220ENST00000508902 SPAG8Q99932 426 aaPredicted RBP13.52□□□□□ -0.25
CLDND1-220ENST00000508902 RETNQ9HD89 108 aa13.52□□□□□ -0.25
CLDND1-220ENST00000508902 UBQLN2Q9UHD9 624 aa13.52□□□□□ -0.25
CLDND1-220ENST00000508902 U3KQE9 123 aa13.52□□□□□ -0.25
CLDND1-220ENST00000508902 DYNC2H1Q8NCM8 4307 aaKnown RBP13.51□□□□□ -0.25
CLDND1-220ENST00000508902 IFNA4P05014 189 aa13.51□□□□□ -0.25
CLDND1-220ENST00000508902 CRYBB3P26998 211 aa13.51□□□□□ -0.25
CLDND1-220ENST00000508902 YPEL3P61236 119 aaPredicted RBP13.51□□□□□ -0.25
CLDND1-220ENST00000508902 RBPMS2Q6ZRY4 209 aaKnown RBP13.51□□□□□ -0.25
CLDND1-220ENST00000508902 ZNF431Q8TF32 576 aaPredicted RBP13.51□□□□□ -0.25
CLDND1-220ENST00000508902 IGKV3-7A0A075B6H7 116 aa13.5□□□□□ -0.25
CLDND1-220ENST00000508902 FAM240BA0A1B0GVZ2 78 aa13.5□□□□□ -0.25
CLDND1-220ENST00000508902 MED6O75586 246 aa13.5□□□□□ -0.25
CLDND1-220ENST00000508902 DFFBO76075 338 aa13.5□□□□□ -0.25
CLDND1-220ENST00000508902 ZNF90Q03938 601 aa13.5□□□□□ -0.25
CLDND1-220ENST00000508902 ZNF124Q15973 351 aa13.5□□□□□ -0.25
CLDND1-220ENST00000508902 IAH1Q2TAA2 248 aaPredicted RBP13.5□□□□□ -0.25
CLDND1-220ENST00000508902 FAM24BQ8N5W8 94 aa13.5□□□□□ -0.25
CLDND1-220ENST00000508902 STPG3Q8N7X2 389 aa13.5□□□□□ -0.25
CLDND1-220ENST00000508902 RCHY1Q96PM5 261 aa13.5□□□□□ -0.25
CLDND1-220ENST00000508902 GINS3Q9BRX5 216 aa13.5□□□□□ -0.25
CLDND1-220ENST00000508902 C11orf1Q9H5F2 150 aa13.5□□□□□ -0.25
CLDND1-220ENST00000508902 TRAV30A0A087WSZ9 112 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 SSSCA1O60232 199 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 TOMM40O96008 361 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 PSG1P11464 419 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 GPX4P36969 197 aaPredicted RBP13.49□□□□□ -0.25
CLDND1-220ENST00000508902 NKX2-1P43699 371 aaPredicted RBP13.49□□□□□ -0.25
CLDND1-220ENST00000508902 ATP5IP56385 69 aaPredicted RBP13.49□□□□□ -0.25
CLDND1-220ENST00000508902 SPANXN5Q5MJ07 72 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 ETFRF1Q6IPR1 90 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 TCF24Q7RTU0 167 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 NRARPQ7Z6K4 114 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 NOXA1Q86UR1 476 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 GBGT1Q8N5D6 347 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 TUBA4BQ9H853 241 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 AGRNO00468 2067 aa13.49□□□□□ -0.25
CLDND1-220ENST00000508902 IFNA21P01568 189 aa13.48□□□□□ -0.25
CLDND1-220ENST00000508902 MBPP02686 304 aaPredicted RBP13.48□□□□□ -0.25
CLDND1-220ENST00000508902 TFPI2P48307 235 aa13.48□□□□□ -0.25
CLDND1-220ENST00000508902 THAP8Q8NA92 274 aa13.48□□□□□ -0.25
CLDND1-220ENST00000508902 CIB3Q96Q77 187 aaPredicted RBP13.48□□□□□ -0.25
CLDND1-220ENST00000508902 PAIP2BQ9ULR5 123 aaKnown RBP13.48□□□□□ -0.25
CLDND1-220ENST00000508902 SCGB1D2O95969 90 aa13.47□□□□□ -0.25
CLDND1-220ENST00000508902 IL4P05112 153 aa13.47□□□□□ -0.25
CLDND1-220ENST00000508902 ARL16Q0P5N6 197 aa13.47□□□□□ -0.25
CLDND1-220ENST00000508902 IL15RAQ13261 267 aa13.47□□□□□ -0.25
CLDND1-220ENST00000508902 LAMTOR1Q6IAA8 161 aa13.47□□□□□ -0.25
CLDND1-220ENST00000508902 TMEM14EPQ6UXP3 125 aa13.47□□□□□ -0.25
CLDND1-220ENST00000508902 TMEM182Q6ZP80 229 aaPredicted RBP13.47□□□□□ -0.25
CLDND1-220ENST00000508902 ACOT7LQ6ZUV0 252 aa13.47□□□□□ -0.25
CLDND1-220ENST00000508902 GLMPQ8WWB7 406 aa13.47□□□□□ -0.25
CLDND1-220ENST00000508902 IL5P05113 134 aa13.46□□□□□ -0.25
CLDND1-220ENST00000508902 NPPCP23582 126 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms