RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 FGF12P61328 243 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.65□□□□□ -1.83
NIPBL-204ENST00000504430 LINC00052Q96N35 136 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 IGKV6D-41A0A0C4DH26 115 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 MT-ND6P03923 174 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 TLX1NBP0CAT3 122 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 RNASE4P34096 147 aaKnown RBP3.65□□□□□ -1.83
NIPBL-204ENST00000504430 RNASE13Q5GAN3 156 aaKnown RBP3.65□□□□□ -1.83
NIPBL-204ENST00000504430 ZNF678Q5SXM1 525 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 CLDND2Q8NHS1 167 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 B9D2Q9BPU9 175 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 GINS4Q9BRT9 223 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 PLA2G2FQ9BZM2 168 aa3.65□□□□□ -1.83
NIPBL-204ENST00000504430 CUL7Q14999 1698 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 A0A1B0GUV1 79 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 A6NED7 52 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 AKR1C2P52895 323 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 PLGLB1Q02325 96 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 ZC2HC1BQ5TFG8 222 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 C21orf62Q9NYP8 219 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 GTF3C1Q12789 2109 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 COL3A1P02461 1466 aaPredicted RBP3.64□□□□□ -1.83
NIPBL-204ENST00000504430 RGS12O14924 1447 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 OR51F1A6NGY5 319 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 IL7P13232 177 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 GUSBP11Q6P575 273 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 TMUB2Q71RG4 321 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 AAED1Q7RTV5 226 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 ZNF720Q7Z2F6 126 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 CIRBP-AS1Q8TBR5 109 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 VGLL1Q99990 258 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 DNAJC15Q9Y5T4 150 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 ARAP3Q8WWN8 1544 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 CCDC18Q5T9S5 1454 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 SMIM14Q96QK8 99 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 PKMYT1Q99640 499 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 ANKRD31Q8N7Z5 1873 aa3.64□□□□□ -1.83
NIPBL-204ENST00000504430 KIAA1107Q9UPP5 1409 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 FRMPD1Q5SYB0 1578 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 TRGV3P03979 118 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 MRPL54Q6P161 138 aaKnown RBP3.63□□□□□ -1.83
NIPBL-204ENST00000504430 ZNF471Q9BX82 626 aaPredicted RBP3.63□□□□□ -1.83
NIPBL-204ENST00000504430 FGFBP2Q9BYJ0 223 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 COL18A1P39060 1754 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 KRASP01116 189 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 MT-ATP8P03928 68 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 ZNF19P17023 458 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 GNB2P62879 340 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 Q5BKY6 102 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 TMEM256Q8N2U0 113 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 DEFB126Q9BYW3 111 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 NCAPD3P42695 1498 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 KDM5AP29375 1690 aaKnown RBP3.63□□□□□ -1.83
NIPBL-204ENST00000504430 TNRC6AQ8NDV7 1962 aaKnown RBP3.63□□□□□ -1.83
NIPBL-204ENST00000504430 GPATCH8Q9UKJ3 1502 aaKnown RBP3.63□□□□□ -1.83
NIPBL-204ENST00000504430 CEP164Q9UPV0 1460 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 TRGV10A0A0A0MS01 117 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 IGLV1-44P01699 117 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 IGHV3-13P01766 116 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 HSPB1P04792 205 aaKnown RBP3.63□□□□□ -1.83
NIPBL-204ENST00000504430 DYNLT3P51808 116 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 ORMDL3Q8N138 153 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 C10orf126Q8N4M7 172 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 MIEN1Q9BRT3 115 aa3.63□□□□□ -1.83
NIPBL-204ENST00000504430 ZCCHC11Q5TAX3 1644 aaKnown RBP3.62□□□□□ -1.83
NIPBL-204ENST00000504430 OR2T8A6NH00 312 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 SLPIP03973 132 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 TRGC1P0CF51 173 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 DEFA4P12838 97 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 TSPEAR-AS2P59090 65 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 TAS2R45P59539 299 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 ZNF705AQ6ZN79 300 aaPredicted RBP3.62□□□□□ -1.83
NIPBL-204ENST00000504430 MSRB3Q8IXL7 192 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 ZFP62Q8NB50 900 aaPredicted RBP3.62□□□□□ -1.83
NIPBL-204ENST00000504430 NPCDR1Q9BY65 106 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 LINC00588Q9Y4M8 146 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 GRIFINA4D1Z8 144 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 CDC42EP2O14613 210 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 SRP14P37108 136 aaKnown RBP3.62□□□□□ -1.83
NIPBL-204ENST00000504430 KRTAP4-8Q9BYQ9 185 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 TAS2R8Q9NYW2 309 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 TRAPPC8Q9Y2L5 1435 aa3.62□□□□□ -1.83
NIPBL-204ENST00000504430 A8MWP4 228 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 SYNGR2O43760 224 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 IGHV3-11P01762 117 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 GIG44P09565 113 aaPredicted RBP3.61□□□□□ -1.83
NIPBL-204ENST00000504430 UBE2BP63146 152 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 EIF5AP63241 154 aaKnown RBP3.61□□□□□ -1.83
NIPBL-204ENST00000504430 Q6AWC8 147 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 ZNF880Q6PDB4 577 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 TMEM91Q6ZNR0 172 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 FOXI2Q6ZQN5 318 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 KIAA1551Q9HCM1 1747 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 IGKV3D-20A0A0C4DH25 116 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 GEMIN2O14893 280 aaKnown RBP3.61□□□□□ -1.83
NIPBL-204ENST00000504430 IFITM1P13164 125 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 FOXF1Q12946 379 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 XP32Q5T750 250 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 OR4B1Q8NGF8 309 aa3.61□□□□□ -1.83
NIPBL-204ENST00000504430 TMEM191AQ9H0A3 160 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms