RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 CAMPP49913 170 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 ATP5J2P56134 94 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 PRR20EP86478 221 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 PRR20CP86479 221 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 PRR20DP86480 221 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 PRR20BP86481 221 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 PRR20AP86496 221 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 MZT1Q08AG7 82 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 EIF4EBP1Q13541 118 aaPredicted RBP4.87□□□□□ -1.63
LINC01340-201ENST00000504012 FXYD3Q14802 87 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 CCL15Q16663 113 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 IZUMO4Q1ZYL8 232 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 C12orf74Q32Q52 190 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 ALKBH6Q3KRA9 238 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 FAM27BQ5VT28 67 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 ACP7Q6ZNF0 438 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 H2BFWTQ7Z2G1 175 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 TEN1Q86WV5 123 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 MKXQ8IYA7 352 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 TMEFF1Q8IYR6 380 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 ZNF808Q8N4W9 903 aaPredicted RBP4.87□□□□□ -1.63
LINC01340-201ENST00000504012 TMEM178AQ8NBL3 297 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 OSR1Q8TAX0 266 aaPredicted RBP4.87□□□□□ -1.63
LINC01340-201ENST00000504012 TMEM158Q8WZ71 300 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 RND1Q92730 232 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 ARPC1AQ92747 370 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 C16orf92Q96LL3 132 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 LINC00479Q96M42 142 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 MGST2Q99735 147 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 NAA38Q9BRA0 125 aaKnown RBP4.87□□□□□ -1.63
LINC01340-201ENST00000504012 SSBP3Q9BWW4 388 aaPredicted RBP4.87□□□□□ -1.63
LINC01340-201ENST00000504012 CHRNA10Q9GZZ6 450 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 IFI27L2Q9H2X8 130 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 RAB9BQ9NP90 201 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 AP5S1Q9NUS5 200 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 FOXA2Q9Y261 457 aaPredicted RBP4.87□□□□□ -1.63
LINC01340-201ENST00000504012 RAXQ9Y2V3 346 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 KLF12Q9Y4X4 402 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 WNT6Q9Y6F9 365 aa4.87□□□□□ -1.63
LINC01340-201ENST00000504012 PHF3Q92576 2039 aaKnown RBP4.87□□□□□ -1.63
LINC01340-201ENST00000504012 TRBV20-1A0A075B6N2 111 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 IGLV3-32A0A0A0MS00 114 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 C5orf63A6NC05 138 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 SMIM9A6NGZ8 99 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 SRRM4A7MD48 611 aaKnown RBP4.86□□□□□ -1.63
LINC01340-201ENST00000504012 NPIPB6E9PJ23 425 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 ZG16O60844 167 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 MOSP00540 346 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 GCSHP23434 173 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 CFHR2P36980 270 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 ZNF157P51786 506 aaPredicted RBP4.86□□□□□ -1.63
LINC01340-201ENST00000504012 FXYD2P54710 66 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 NNATQ16517 81 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 POM121L1PQ3SYA9 428 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 LY6G5CQ5SRR4 150 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 CXCL17Q6UXB2 119 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC01340-201ENST00000504012 OR10J6PQ8NGY7 276 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 RNF138Q8WVD3 245 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 FAM168AQ92567 244 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 DLX4Q92988 240 aaPredicted RBP4.86□□□□□ -1.63
LINC01340-201ENST00000504012 TSACCQ96A04 125 aaPredicted RBP4.86□□□□□ -1.63
LINC01340-201ENST00000504012 PLPPR2Q96GM1 343 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 CHAC1Q9BUX1 264 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 FAM234AQ9H0X4 552 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 C7orf69Q9H7B7 122 aa4.86□□□□□ -1.63
LINC01340-201ENST00000504012 SNRNP200O75643 2136 aaKnown RBP4.85□□□□□ -1.63
LINC01340-201ENST00000504012 PRSS38A1L453 326 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 FAM90A27PA6NNH2 459 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 NPIPB5A8MRT5 1133 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 HIGD1CA8MV81 97 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 GGTLC3B5MD39 225 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 H0YIG0 161 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 PRKNO60260 465 aaPredicted RBP4.85□□□□□ -1.63
LINC01340-201ENST00000504012 PRTN3P24158 256 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 CDAP32320 146 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 INSL3P51460 131 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 HHEXQ03014 270 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 MIC13Q5XKP0 118 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 MOB3BQ86TA1 216 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 ABHD12Q8N2K0 398 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 DRAM1Q8N682 238 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 ZNF441Q8N8Z8 693 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 OR5AN1Q8NGI8 311 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 PIGCQ92535 297 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 NABP1Q96AH0 204 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 CARD19Q96LW7 228 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 C18orf15Q96N68 181 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 GPHA2Q96T91 129 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 CDX2Q99626 313 aaPredicted RBP4.85□□□□□ -1.63
LINC01340-201ENST00000504012 NUDT22Q9BRQ3 303 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 EMC6Q9BV81 110 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 RPP21Q9H633 154 aaKnown RBP4.85□□□□□ -1.63
LINC01340-201ENST00000504012 ZNF355PQ9NSJ1 428 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 DEPPQ9NTK1 212 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 MBNL3Q9NUK0 354 aaKnown RBP4.85□□□□□ -1.63
LINC01340-201ENST00000504012 HRASLS2Q9NWW9 162 aa4.85□□□□□ -1.63
LINC01340-201ENST00000504012 ALPK2Q86TB3 2170 aa4.84□□□□□ -1.63
LINC01340-201ENST00000504012 NCOA6Q14686 2063 aaPredicted RBP4.84□□□□□ -1.63
LINC01340-201ENST00000504012 TRAV5A0A0B4J249 113 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms